Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_000909_16                                                                                                                 top


Strain : Methanocaldococcus jannaschii DSM 2661 RefSeq :NC_000909 (chromosome circular)
CRISPR id : NC_000909_16
DR consensus (30 bp) : TTTCCATCCTCCAAGAGGTCTGATTTTAACNumber of repetitions :5
Begin Position : 1219845 End Position : 1220165

1219845TTTCCATCCTCCAAGAGGTCTGATTTTAACCAGGAGATTAATTTATTCCCAATTATATTGATATTTTTAGCTATAA 1219920
1219921TTTCCATCCTCCAAGAGGTCTGATTTTAACGAGGAGAACTAATATATTACAATAATAATAATAATTTATTAAG 1219993
1219994TTTCCATCCTCCAAGAGGTCTGATTTTAACAATGGTGTCATTTATGAACTATCAGAATGCAATTAACG 1220061
1220062TTTCCATCCTCCAAGAGGTCTGATTTTAACGGAGGATATAAAGGAAGGATTAGGGGAAGCAGTTAGACAATTGG 1220135
1220136TTTCCATCCTCCAAGAGGTCTGATTTTAAC1220165
Left flanking sequence : Till position 1219845 (length bp)
ATAAAAAAGCTAAAAATTAATTTTTTTAAATCTTAATATCATCCATTCCTGATTTTAACTACAGGAAATC
TCAATGAGAGTGATTTAGAGTTCATAAAGG
Right flanking sequence : From position 1220165 (length bp)
AGGCGGTCATATCAGATGATTTATTTTATAATCTTTCTGATATTTATATTTTACTACCCACATTTTACCG
ATGGGTAGGTTTCACCTTTTATTTATATAC

Print the CRISPR sequence : From position bp To position bp