CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_000909_6
Flanking alignement tool
Page manual
  
Home Page
NC_000909_6                                                                                                                 
top
Strain :
Methanocaldococcus jannaschii DSM 2661
RefSeq :
NC_000909 (chromosome circular)
CRISPR id :
NC_000909_6
DR consensus (30 bp) :
ATTTCCATTCCCCGAGGGATCTGATTTTAC
Number of repetitions :
12
Begin Position :
351694
End Position :
352468
351694
GTTTCCATTCCCTGAGGGATCTGATTTTAC
GGAGTTGAAGCTCATAAAATTGTCCAAGATGTCGATTT
351761
351762
ATTTCCATTCCCCGAGGGATCTGATTTTAC
ATTCAATAAAAAAAAATAAGATAAAAAATCTTATTTAAG
351830
351831
ATTTCCATTCCCTGAGGGATCTGATTTTAC
GTCATCTTCTATTTGTTGTATGTATTTTAATACGGT
351896
351897
ATTTCCATTCCCCGAGGGATCTGATTTTAC
CATATTGCTCTTCCCCATCTGGTTCATCAGTGTAAGCATT
351966
351967
ATTTCCATTCCCCGAGGGATCTGATTTTAC
TATTTTTCCAATTGTTCAGGGGAAAGTCCTCCCTTC
352032
352033
ATTTCCATTCCCCGAGGGATCTGATTTTAC
GTGGATTACCAGCTGATATGGGATTAGGTAGTGGATT
352099
352100
ATTTCCATTCCCCGAGGGATCTGATTTTAC
GATGAGAGAGTTATTTATGTAAGTGTTAAAGTTGTAGAA
352168
352169
ATTTCCATTCCCCGAGGGATCTGATTTTAC
ATAATAATAGAGATAATACAGTTCCCAAAATGAATAA
352235
352236
ATTTCCATTCCCCGAGGGATCTGATTTTAC
TTAACTCAACTTTTATTGAAGTTATTTTTATGTTGATTTGT
352306
352307
ATTTCCATTCCCCGAGGGATCTGATTTTAC
ACAATAGAGGTAAAAGAGGTTATAGGGTAATATTTG
352372
352373
ATTTCCATTCCCCGAGGGATCTGATTTTAC
GATTTAATCTGAGTATTTTGTACATTTTGAGGAGCA
352438
352439
ATTTCCATTCCCCGAGGGATCTGATTTTAC
352468
Left flanking sequence : Till position 351694 (length
bp)
TTTTAATTTTCTTCAAGATTTTATTTACATAGTCCCATTCTTTTTTTAACATTGATTATCTTCTAATGAG
TTTCCATTCCCTTCTCCCTATTCATCTGTT
Right flanking sequence : From position 352468 (length
bp)
AGGGGGACTTTTTCAATATATTATACCTTAACTCTCCTGATATTTAAGCTTTTCTATACCATAATTTCTT
AAGGATAAATAACCGTTTTGCAATATAAAC
Print the CRISPR sequence : From position
bp To position
bp