CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_000961_2
Flanking alignement tool
Page manual
  
Home Page
NC_000961_2                                                                                                                 
top
Strain :
Pyrococcus horikoshii OT3
RefSeq :
NC_000961 (chromosome circular)
CRISPR id :
NC_000961_2
DR consensus (29 bp) :
GTTTCCGTAGAACTAAATAGTGTGGAAAG
Number of repetitions :
26
Begin Position :
150418
End Position :
152173
150418
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
TAGAGCTCGAAGTAGACTTTAACCCCAGCGGTTCCACT
150484
150485
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
AGGTCTGGCTCCTCATCCTCAGGAGGCTTCTTAAATGG
150551
150552
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
GACTTGAAGAAGGATGTAATAACATATGATGACTTCATAGAAG
150623
150624
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
ACTAAGTTGCTAACTAGAGTATTGCTCATCCAAGAATCATACTTCAA
150699
150700
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
TATCTGAAGCACTATTGCCAACAAATTCTGGAACAATCC
150767
150768
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
TTGATGACCTTGCCCATTTAGAGTATGACCCAGAAACT
150834
150835
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
CTGATTTATACGGGTTCTCTGGTTTTTCTACCTCAA
150899
150900
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
ACTTTCACGAAGACATCAGGGTTTCTCCGATTCCCTCT
150966
150967
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
ACGTCAATTCCATAGCCCAAATTCTCAGCTACGTCGAATTCA
151037
151038
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
GGCGTGGAAACATCCCAGCGAACGGTTACGACGACATAAC
151106
151107
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
AGCGTCCAGCCACTTGCTGGAACATTTATTGTTTCTAGCTCG
151177
151178
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
ACAGTCGTATACAATCCTTGCAGACATGTGCCCGCAGATGAACTTTCCA
151255
151256
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
CATAAAATCTAATAAGGATATCTGTAGACATCAAGCGA
151322
151323
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
TCAACCTTGTCATCAGCAACCGTGTAGGTTATTGTGTACTTTGGGGTTTCC
151402
151403
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
AAACTGTCGAGGCCTGCGTTTTGCAGGAACAACCCAA
151468
151469
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
ATAGTAGCATTACTACGACATACTCTGGGCTCTCTGAAT
151536
151537
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
CTCAGCTCTTCTGGGGTTATGACGCCTCCCTCTATAG
151602
151603
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
AAGAAGGGTAGGAGGAAGAGGAGAGAGGAGTTCTTTGGCTGG
151673
151674
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
ATTAATCCCGTGTTGTCAAGTACTGCGATGCGGAAGTCT
151741
151742
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
TGTAATGGTTATTTTTCCTCCAAACTCCGTACCAAACTT
151809
151810
GTTTCCGTAGAACTAAATAGTGTGGAAAG
TTCTTTAGGCTCTGATAATCTCTTTCTCTCTTAAATG
151875
151876
GTTTCCGTAGAACTAAATAGTGTGGAAAG
ACTTCGCCAATTGCCGACGCCCTTTCCGACACTTGCCT
151942
151943
GTTTCCGTAGAACTCAGTAGTGTGGAAAG
ACCTCTGGGGTATGACTTGCCACAACAACACCACCTCC
152009
152010
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
AGAACCAGTAGCCTGTTAATGAGCGGTGCTGGCAGCTGG
152077
152078
GTTTCCGTAGAACTTAGTAGTGTGGAAAG
CCAAACTCTTCCTTGTTTTCAAGCTCCTTCTCAATGGT
152144
152145
GTTTCCGTAGAACTAAATAGTGCCTAAAT
152173
Left flanking sequence : Till position 150418 (length
bp)
AGGTTTATAAATGAAGTCCAGTATTACCGGTTCCCACAGTGAGTAAATTATATAAACTTTGAGAGGCTTT
TATTAAACGAATAAAGCAAAAAACCCAAAA
Right flanking sequence : From position 152173 (length
bp)
CATAATTTAGGTGACCAGGGATGAAGTCTCCGATATATATTACCCAACCTGGTATCCTTGAAAGGAAGGC
AAATACCCTGTTCTTTGTTAACGAAGAGAT
Print the CRISPR sequence : From position
bp To position
bp