Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_002939_1                                                                                                                 top


Strain : Geobacter sulfurreducens PCA RefSeq :NC_002939 (chromosome circular)
CRISPR id : NC_002939_1
DR consensus (37 bp) : GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCNumber of repetitions :38
Begin Position : 74806 End Position : 77552

74806GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCAACTTTGCCGGGGATTCTCTTTTCTGTGAATGGGCT 74878
74879GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTTTTATGCCAAATGTACGGACATTGCAAGTTAATC 74950
74951GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTTGATGTCATCGCCCACCTGAAGGTACAGGTCGCC 75022
75023GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGCAAGGGCTGTGCCGTCCGTAACGTTGTCCGGTTTG 75095
75096GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGCGATGGTCGGACGCTTGAGGACCAGGTTGTACGCCGC 75170
75171GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGTCTTCAAGCCCGCTGGTGATTTTGAGGGTAAATTCG 75244
75245GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTCGTAGCGCGTTTCCCGCGTCAGGCAGTACCCCATGAA 75319
75320GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCCCGGTAACGGCCTTATTAACATCATCTGATGATTCT 75392
75393GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCCCAAATAGACTGAAGGCTGTTTATAAGTTCTGGATT 75465
75466GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGCGTGCTCAGGGAGGGACAAAGGGTCGAACATGTCAC 75539
75540GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTAAACTTTTTGGGGGGCCAGCGGGGGGCTTGCCCC 75611
75612GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCAACCGCTCCAGGCCACCCTCCTGCCGGCACTGGGC 75683
75684GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTTGATCATTGAGAGGGTGATCCGCTCTCCGGAGAGT 75756
75757GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTTGTATAACGGCTGCCGGATCAACAAGGGGAGTTTCG 75830
75831GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTTGTCAAGCTCCCCCTTCCTGTCTGGTGGACAATAC 75903
75904GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTGAATCTCAGTGAGTGTTTCAGCTCCCAACATCACAA 75977
75978GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCACGCTTGATCCAGTCCACCAACTGTTCTTCCACCCT 76050
76051GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTCCTTGCGGGCGCGCTCGGCGTTTCGTTCCTGTTCGG 76124
76125GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCCGTCTGACCAGTTCATATTGTTGACGGCCCAGTCC 76196
76197GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTTGGATATTAATGGCAAAGGCTACAAACGCATCGCC 76269
76270GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGACGTCGACACCTGGCGCGCCGCCGGCATGGTGGCCG 76343
76344GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCCTATTGTAACCGGCGCTTGCGTAATCCAGGTGTATTG 76417
76418GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGTCTCGATAGCCGCCGTGTTTTCGCCGACGGTGGTC 76490
76491GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCCTCTCTCAGGGCGCACAGGTAATCCTCCAGCGGCG 76562
76563GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGTGGTGATGCTGGAAGTCGTGGGCACCTCCCCAGTCG 76636
76637GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCCACGTATACCGTCGCGCCCTTGTGCACGAAGTCGACC 76710
76711GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTTCATGACTTTGCGGTACTTCTCATAGGCTTCGGAT 76783
76784GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTGCAACCCCTTCTCCTTCTCCTTCTCCTTATATAAAA 76857
76858GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCACGGCAGACCGGCCCGAGACACTGACCCAGGAAGAA 76930
76931GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTACCTCTACCGCGACAAGGAATATCACGGACATCTC 77003
77004GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCATGTGTCCGCTGGTGAGCGTGACGCGATCCTCGCT 77075
77076GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGGCATAGTTGTAGGTGACTTGCACCAGAGCGACCGG 77148
77149GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTCGTACATCTGCACCACGGCGGCGTGCCGTTTTTCCT 77222
77223GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCATCGCTGTGCATGCTGTCGAATTCGGCGTGGGTGA 77294
77295GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGGGTAACGTCTCGGGCAGGTAGTTGTTTTCCAAGGGT 77368
77369GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCTTGCTCAACGAAGAAATATTCCGCCTCTGCCCGTT 77440
77441GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGCGACGAGATGCGCCCATCCAGCAAGCGAGCCCCTCCCCC 77515
77516GTATTCCGGGGCCATGATGCCCCGGCCTCATTGAAGC77552
Left flanking sequence : Till position 74806 (length bp)
TGAGTTCAATGATAAATCGGATGTGTAACGTGGAAGGTCTGTTATACTGCTCGAATTCCATGGTATGAGA
CCCCATGGAATCAAGGGCGGGAAAAGAGCC
Right flanking sequence : From position 77552 (length bp)
TCGGCCGTCGATTTGCCCGAACTGGCATACCCCTCGAAGTATTCCGGGGCCATTGCGATCATGACCAATG
CCGCCATCACCTTTTCCGACGCAGTCGCTG
Print the CRISPR sequence : From position bp To position bp