Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_003143_3                                                                                                                 top


Strain : Yersinia pestis CO92 RefSeq :NC_003143 (chromosome circular)
CRISPR id : NC_003143_3
DR consensus (28 bp) : TTTCTAAGCTGCCTGTGCGGCAGTGAACNumber of repetitions :9
Begin Position : 2769294 End Position : 2769802

2769294TTTGATTATTGCCTGTGCGGCAGTGAACTCAGGGGACTGGCGAACAATGTCTTTCATGAT 2769353
2769354TTTCTAAGCTGCCTGTGCGGCAGTGAACGAAAAGGTAAGATGGGCAAGCTTCTAGTAGTT 2769413
2769414TTTCTAAGCTGCCTGTGCAGCAGTGAACATTATCTGAATGGCATTTTCTTTGGCGCAGAT 2769473
2769474TTTCTAAGCTGCCTGTGCGGCAGTGAACTCGCCATTCCGTGAACCTGAGCGCGTTCGCGA 2769533
2769534TTTCTAAGCTGCCTGTGCGGCAGTGAACATATTCTCGAGCGATAGCAATAGCCATTCCAC 2769593
2769594TTTCTAAGCTGCCTGTGCGGCAGTGAACTCGGTCAAACAAATTTAGGCGACGATTTAACA 2769653
2769654TTTCTAAGCTGCCTGTGCGGCAGTGAACAAAAAGAATTTGGGATTAAAGTTACCCATCAG 2769713
2769714TTTCTAAGCTGCCTGTGCGGCAGTGAACTCAATGCCTGAATCTCTGGCGTGATAGCTGCGG 2769774
2769775TTTCTAAGCTGCCTGTGCGGCAGTGAAC2769802
Left flanking sequence : Till position 2769294 (length bp)
AAGTCAGTAATAAAAGATGCCATTCTCCCTGTTGTCAGTTACAAAATGCGCTTCCGCTCGCAATTTTGCT
CCCCAAATAGCATCAGCACATGGCCCAGGA
Right flanking sequence : From position 2769802 (length bp)
AGTAAGATAATACGATAACATCCTGTTTGTAAAATACTTATTTCGCTAATGGGGAAAAAACCCTTTTTTT
AGACCACCGATAACCACAATGTAAAATCAA
Print the CRISPR sequence : From position bp To position bp