Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_003155_12                                                                                                                 top


Strain : Streptomyces avermitilis MA-4680 RefSeq :NC_003155 (chromosome circular)
CRISPR id : NC_003155_12
DR consensus (29 bp) : GTGCTCTCCGCGCGAGCGGAGGTGAACCGNumber of repetitions :60
Begin Position : 8993350 End Position : 8996980

8993350GTGCTCTCCGCGCGAGCGGAGGTGAACCGACACGGCTGTTGAGCCGGACGGCGCCGAGACC 8993410
8993411GTGCTCTCCGCGCGAGCGGAGGTGAACCGGCCCGATCGAGGGCGGTGTGAGCATGAGTATC 8993471
8993472GTGCTCTCCGCGCGAGCGGAGGTGAACCGACGTCGTGGGACTGGTTGGCCGCCGCGTTGAA 8993532
8993533GTGCTCTCCGCGCGAGCGGAGGTGAACCGCAGGTCGCCAGCCGCTGCCCGGTGTCGCAGTC 8993593
8993594GTGCTCTCCGCGCGAGCGGAGGTGAACCGCCCCATGATGATTTGGCCAGGCACCCGAACCA 8993654
8993655GTGCTCTCCGCGCGAGCGGAGGTGAACCCCACTAACTCAAGACGCAATGATCACAATCGGA 8993715
8993716GTGCTCTCCGCGCGAGCGGAGGTGAACCGGCGATGATGCCGGCGTCGACGGCGATGGGGAA 8993776
8993777GTGCTCTCCGCGCGAGCGGAGGTGAACCGTCGTTGAAGCTCATGCCGGTGCGCTTCTCCAG 8993837
8993838GTGCTCTCCGCGCGAGCGGAGGTGAACCGCCGCCCGCGCCGCACTCATCCCCGACCAGGCG 8993898
8993899GTGCTCTCCGCGCGAGCGGAGGTGAACCGCCCGTGAGCAGCCGACGTTCGGTGACCGGGGG 8993959
8993960GTGCTCTCCGCGCGAGCGGAGGTGAACCGCCGTCGATGAGCGCCTAGCCTTGCTGGAACGA 8994020
8994021GTGCTCTCCGCGCGAGCGGAGGTGAACCGTCCATGCAGCACCGCGGCGACCGCCACCCCCC 8994081
8994082GTGCTCTCCGCGCGAGCGGAGGTGAACCGTTGGGGCAGTAGGTCAGCGAGGATGCCGAGCC 8994142
8994143GTGCTCTCCGCGCGAGCGGAGGTGAACCGGAGAACTACGACGAGATGGCCAAGAAGACCGT 8994203
8994204GTGCTCTCCGCGCGAGCGGAGGTGAACCGAACGACACGGCCGCCTTCAGCCCGCCCCAGAC 8994264
8994265GTGCTCTCCGCGCGAGCGGAGGTGAACCGCCGCCCGCACCACTGACGTGCGACGAGTGCGG 8994325
8994326GTGCTCTCCGCGCGAGCGGAGGTGAACCGGCGCGCGGGTCCAACGTCCAGGTCGTCCTCAC 8994386
8994387GTGCTCTCCGCGCGAGCGGAGGTGAACCGTCCACCACGCGCTCCAGGAAGCTGGTCCCCTC 8994447
8994448GTGCTCTCCGCGCGAGCGGAGGTGAACCTGGGTGTTCGTCGGCATCCCGGTGCTCGTCGTC 8994508
8994509GTGCTCTCCGCGCGAGCGGAGGTGAACCGCTCGGCAAGTCCGGCGCCGACGCCCTCTACGA 8994569
8994570GTGCTCTCCGCGCGAGCGGAGGTGAACCGCGCAGCGTCGGGTGCTGCCGCTTCATCAGGAC 8994630
8994631GTGCTCTCCGCGCGAGCGGAGGTGAACCGCAAGCGCGGTGTACACGATGTGGGGGTGGATC 8994691
8994692GTGCTCTCCGCGCGAGCGGAGGTGAACCGGTCCGCGCGGACCCGGGCGTCGGTGTCGACGC 8994752
8994753GTGCTCTCCGCGCGAGCGGAGGTGAACCGCAGTTCGGCAGCCTCCTCGGCGACATCTTCGG 8994813
8994814GTGCTCTCCGCGCGAGCGGAGGTGAACCGTGTGACGCCTGCCCCATCGCCAACGCGACGCC 8994874
8994875GTGCTCTCCGCGCGAGCGGAGGTGAACCTTCTTCGCCCCGGCCGTCCCCGCCGCCGCCTTC 8994935
8994936GTGCTCTCCGCGCGAGCGGAGGTGAACCGGCCCGCACCTGCAGACGTACGTCCAGTCCAAC 8994996
8994997GTGCTCTCCGCGCGAGCGGAGGTGAACCGTCCTGGGACGCCCTCAAGGTCCCGAACGTCTG 8995057
8995058GTGCTCTCCGCGCGAGCGGAGGTGAACCGGTGGGGGAGGCTGCGGAGGCGCAGACCACGTT 8995118
8995119GTGCTCTCCGCGCGAGCGGAGGTGAACCGTACGCGTGGGGCGGCATCCTGGTGCGCACCTC 8995179
8995180GTGCTCTCCGCGCGAGCGGAGGTGAACCGGCTGCCATCGAGTCATCCCCTGCGACCCCGGG 8995240
8995241GTTCTCTCCGCGCGAGCGGAGGTGAACCGGTTTCGTACCCGAGGGCCGGGCCGATGATGGT 8995301
8995302GTGCTCTCCGCGCGAGCGGAGGTGAACCGGACATGATCGCAGCCCGATTCCTGCGGCAGGA 8995362
8995363GTGCTCTCCGCGCGAGCGGAGGTGAACCGTCCACGGACGGCAACTGATCCCCGGCATGAAC 8995423
8995424GTGCTCTCCGCGCGAGCGGAGGTGAACCGGTCAACCGCGCGTTCGGCCGCAGCCGGCTGGT 8995484
8995485GTGCTCTCCGCGCGAGCGGAGGTGAACCGCCTGACCGGCTGGCGTTCCAGGCGACGTCGAC 8995545
8995546GTGCTCTCCGCGCGAGCGGAGGTGAACCGTACGCCATCGCCTGGCGTAACGCGCTCCTCAC 8995606
8995607GTGCTCTCCGCGCGAGCGGAGGTGAACCGACCGTCACGTTCGACACGCGGGTCGGGTTGTA 8995667
8995668GTGCTCTCCGCGTGAACGGAGGTGAACCGGACATCCACGGCAACCCGCTGAAGCTGACCCG 8995728
8995729GTGCTCTCCGCGCGAGCGGAGGTGAACCGAAAACCGGGCGCGCCGTGCAACCTGACGGCCC 8995789
8995790GTGCTCTCCGCGCGAGCGGAGGTGAACCGATCAGCAGCATCGCCAAGGCCATCGTGGCGGG 8995850
8995851GTGCTCTCCGCGCGAGCGGAGGTGAACCGGAGCCGGAGGCCCGGCAGACCGCCGTCGCCGA 8995911
8995912GTGCTCTCCGCGCGAGCGGAGGTGAACCGTCCGCCCGAAGAAGGACCGCAGTACCGCCCCGTA 8995974
8995975GTGCTCTCCGCGCGAGCGGAGGTGAACCGGCCCTCAACAGGCCGTCAACCGAGCACGCCAA 8996035
8996036GTGCTCTCCGCGCGAGCGGAGGTGAACCGACGGACAAGGGCATCACCGTCCTTTTCACCTC 8996096
8996097GTGCTCTCCGCGCGAGCGGAGGTGAACCGGAGACCCTTGCGAAGACCAGGCGTGCCAGTGC 8996157
8996158GTGCTCTCCGCGCGAGCGGAGGTGAACCGTCGCGGTGCCGCCACAGCGACGGTCGGGCGCC 8996218
8996219GTGCTCTCCGCGTGAGCGGAGGTGAACCGCTGATGCTCGACATCGCGAAGGGCATGCAGGC 8996279
8996280GTGCTCTCCGCGCGAGCGGAGGTGAACCGGCCGAGAACGAGCGGCTGAAGGCGGCGAAGCC 8996340
8996341GTGCTCTCCGCGCGAGCGGAGGTGAACCGGCCATGGAGTAGCCCTGCTTGAAGGCGTCGTA 8996401
8996402GTGCTCTCCGCGCGAGCGGAGGTGAACCGTCGGACACCGAGGTCAGCGCGTGGCTGCTGTC 8996462
8996463GTGCTCTCCGCGCGAGCGGAGGTGAACCGCCACCGGGGACGTAGCCGACGTCCGCCGCCCC 8996523
8996524GTGCTCTCCGCGTGAGCGGAGGTGAACCGTCGGAGCTGGCCAGGGAGCTGACCACCCGGGT 8996584
8996585GTGCTCTCCGTGCGAGCGGAGGTGAACCGCTTCCAGGTCAGCGGGAACTGGCCAAGGCTGA 8996645
8996646GTGCTCTCCGCACGAGCGGTGGTGAACCGAAGCCGGAGACCGAGCAGCAGGACCAGCCTCA 8996706
8996707GTGCTCTCCGCGCCAGCGGAGGTGAACCGTACTGGATCTTCCCCGTCCGTGACGAGCACGGG 8996768
8996769GTGCTCCCCGCGCGAGCGGAGGTGAACCGCCATGGTGATCTACCACAGCGAACTTGCGGGC 8996829
8996830GTGCTCTCCGCGCGAGCGGAGGTGAACCGGTCCGCCTCGACGGTCTGCACCGGGCGAAGAT 8996890
8996891GTGTTCTCCGCGCGAGCGGAGGTGAACCGTACCCGGTTCAGTGAAGGTCAGCTGGGGCCGT 8996951
8996952GTGCTCTCCGCGCGAGCGGAGGCGAACCG8996980
Left flanking sequence : Till position 8993350 (length bp)
TGGAACCTCAGCCGACGCGCGGGCAGACCAATTCAAGGCGAGTCCATTCGGATACCGTAAAGAACTCGCA
AAGCACCTGAAGGAGGCCAGGTCAGGAAGG
Right flanking sequence : From position 8996980 (length bp)
ACGAAGACGCTTGTCGGCGACGCTTGAAATGTGGCTCAGTCAAGATTTCCGTGAAGCCGATCGTGCGCCT
GTGCGCCGGTGACGCTCCGTCACAGGCCGC
Print the CRISPR sequence : From position bp To position bp