Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_003413_7                                                                                                                 top


Strain : Pyrococcus furiosus DSM 3638 RefSeq :NC_003413 (chromosome circular)
CRISPR id : NC_003413_7
DR consensus (30 bp) : CTTTCAATTCTTTTGTAGTCTTATTGGAACNumber of repetitions :22
Begin Position : 1064076 End Position : 1065543

1064076CTTTCAATTCTTTTGTAGTCTTATTGGAACCGGAGGCTCTACCTAATCATCCTCTTGACACAACTC 1064141
1064142CTTTCAATTCTTTTGTAGTCTTATTGGAACAGTTGACTTCACTACTACTTCTTCATCTATAATTCTA 1064208
1064209CTTTCAATTCTTTTGTAGTCTTATTGGAACGAAGAGAGGTTAGAATAACAGCTATTAGCGTTTCACA 1064275
1064276CTTTCAATTCTTTTGTAGTCTTATTGGAACTTTGGAGATAGAGTTGCAGTAGAAATGATAAGGAA 1064340
1064341CTTTCAATTCTTTTGTAGTCTTATTGGAACCACGGCCTACCTCGCTGAGATCCGGGTAGATGACAGC 1064407
1064408CTTTCAATTCTTTTGTAGTCTTATTGGAACAGGAGAATAAGGTACTTCGACGGCCACACGTCTTATGT 1064475
1064476CTTTCAATTCTTTTGTAGTCTTATTGGAACCAGGAAGTTGTTTGCCAACGGCATAGTAGAGCCCACCCCCCGTCATCGCCCGCAAAAAG 1064564
1064565CTTTCAATTCTTTTGTAGTCTTATTGGAACCTTATAAGATTTTCCCATTTAAGCAGAGCTTAGATAA 1064631
1064632CTTTCAATTCTTTTGTAGTCTTATTGGAACCTGACTTTAGAGACTTATACAATAACAACAACATATCTAAAGTCC 1064706
1064707CTTTCAATTCTTTTGTAGTCTTATTGGAACGCTACAACCCTCCCCTCGTAGTAGTACTTCCCATCGT 1064773
1064774CTTTCAATTCTTTTGTAGTCTTATTGGAACCCTTATATGGGTGTTGTGAAGCAGGATAGAACTCTTGA 1064841
1064842CTTTCAATTCTTTTGTAGTCTTATTGGAACGTCCCCGTAGTCCCTTAGAACTTTGTAGCCCTTCTTC 1064908
1064909CTTTCAATTCTTTTGTAGTCTTATTGGAACCTTCCAGCATTCTCTGCCTTCACGTAAACTTCTGTACCCT 1064978
1064979CTTTCAATTCTTTTGTAGTCTTATTGGAACGCCAATTAAGTTCCTCCAGACAGATGAAGCCAGCAAA 1065045
1065046CTTTCAATTCTTTTGTAGTCTTATTGGAACCGAGGAAGGCTCCCTCTAAACCAGCCAAGGAGGTTAA 1065112
1065113CTTTCAATTCTTTTGTAGTCTTATTGGAACTGGCCACCCACTCCAATGCGCCTTTCACTTTTTGGCCAA 1065181
1065182CTTTCAATTCTTTTGTAGTCTTATTGGAACTATCAAAAGGTTAAGGCTTCTGTAAAAGAACTTA 1065245
1065246CTTTCAATTCTTTTGTAGTCTTATTGGAACTTGCACTCACGTGTAACAAGTACCTGTACAATAGATA 1065312
1065313CTTTCAATTCTTTTGTAGTCTTATTGGAACCAATATTTTTTCAATGTCTGTCATTGTCCCACCTCCT 1065379
1065380CTTTCAATTCTTTTGTAGTCTTATTGGAACTGTTTTCACTAATCGAAGACTTCGTAAGAGATAACGA 1065446
1065447CTTTCAATTCTTTTGTAGTCTTATTGGAACCTGAAGTGCTCTCAGCCGCAAGGACCGCATACTACAA 1065513
1065514CTTTCAATTCTTTTGTAGTCTTATTGGAAC1065543
Left flanking sequence : Till position 1064076 (length bp)
CGGAGGTTATCAGGTTGCCCTACTTGTATAAGTCCGATAGGGCAAAGACAAGTAAGATAATTCAGAGAAT
AATCGAGACGTTTTGTGAATGAAGTCCAAA
Right flanking sequence : From position 1065543 (length bp)
AGGGGGCTTTTTTGCCCCAATCCTCCTACGGAGTAACTACATCACTCGAATTTATAAGCCTTACGGGGCA
TCAACCTTACCCCAGAACCCCCCATTTATA
Print the CRISPR sequence : From position bp To position bp