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CRISPRs details
NC_005838_8
Flanking alignement tool
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NC_005838_8                                                                                                                 
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Strain :
Thermus thermophilus HB27
RefSeq :
NC_005838 (plasmid pTT27 )
CRISPR id :
NC_005838_8
DR consensus (36 bp) :
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
Number of repetitions :
14
Begin Position :
203222
End Position :
204195
203222
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TCCGGCTCGTGAACGGCGAGATTCAGATCATTCCCG
203293
203294
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CATCACCTCGGCCCGGGCCAGGACCACCCCCACCC
203364
203365
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CCGCCTGGCTCGCCGGCCCCATCGCCCGCCTCTGGCAG
203438
203439
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CGCTATGGACCGAAACGACTGCCCACTCGCGAGCGC
203510
203511
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
AACACAGCGTAGACCGTAACGGCCCCCAGCGCGATGC
203583
203584
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CCGAACCGCCGCCTCAGCGCGGTGAGGACCTCGCCCA
203656
203657
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
GTGCGGCTCGTGACCAAGTAGCCATGGGGTACTT
203726
203727
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TTCGGAACCCGCCTGGAGTACGCCCCATATCAGCAG
203798
203799
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CGCTGGGCGGGGATCGCGGCGAGCGTGGTCCTCCC
203869
203870
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
TGTACGCCCTGCGAAACTTTGTGCTCCAAAGCGTGGT
203942
203943
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
AGGGCCTCGAGGCCCTTCACCAGGAGGCCGAGGCGGCG
204016
204017
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
CTGAGGGAGCTGGTAAACGAGCTTGGGAACGCCTG
204087
204088
GTTGCAAACCTCGTTAGCCTCGTAGAGGATTGAAAC
ATTCGCCGCCTCCCAGTAGCCGCGCCACCACCTCAG
204159
204160
GTTGCAAACCTCTTTAGCCTCGTAGAGGATTGATAC
204195
Left flanking sequence : Till position 203222 (length
bp)
TTTTCTCTCGGGTCTTTCCCTTGCGCGTTGACGCATAATCCCCCCGCGTGCGAAAATGGCCTCAAGACCC
CCCGCCTGGAGCCGCTTCCTGGAGGGGGCC
Right flanking sequence : From position 204195 (length
bp)
TGTCTCGCCTGTCAAGCGACCCCTTGGTGCGGCTGGGTCGCGTAGTACTCCCTGAGCCTGCCCATCATCC
GCCCGAGGAGCTTGTGGGCCACGGCTAAAA
Print the CRISPR sequence : From position
bp To position
bp