Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_006361_12                                                                                                                 top


Strain : Nocardia farcinica IFM 10152 RefSeq :NC_006361 (chromosome circular)
CRISPR id : NC_006361_12
DR consensus (29 bp) : GGGCTCATCCCCGCGTGCGCGGGGAGCACNumber of repetitions :27
Begin Position : 4459384 End Position : 4460995

4459384GGGATTATCCCCGCGCGCGGGGAGCACCTATCGCACAGCACCCATAGGTTGTTGTCGTC 4459442
4459443GGACTCATCCCCGCATGCGCGGGGAGCACGGCGGGGGCGGGGGTGGCGGCGGCGGTACCGG 4459503
4459504GGGCTCATCCCCGCATGCGCGGGAGCACCGCTTCCCCGACGACGGCGGCGCCCGTTCGC 4459562
4459563GGGCTCATCCCCGCATGCGCGGGGAGCACTCGACCTGGCGGCGCTGGACCTCATCCCAGTA 4459623
4459624CGGCTCATCCCCGCATGCGCGGGGAGCACCTGGTCACCGCAGTCGCGCCGTTGATCCCGCT 4459684
4459685GGGCTCATCCCCGCATGCGCGGGGAGCACGGGCTGTCGCCGATGTCAGGGCCGTCAGCGGT 4459745
4459746GGGCTCATCCCCGCGTGCGCGGGGAGCACAAGACCGCGGCCACCCAGGGCAAGTTCATGCT 4459806
4459807GGCCTCATCCCCGCGTGCGCGGGGAGCACCTACCGCCGAAACGATTCGATCCAAATAGATG 4459867
4459868TGGCTCATCCCCGCGTGCGCGGGGAGCACTCGGGTGGTTCATCTCGTTCGTCGCCGTCCCC 4459928
4459929GGGCTCATCCCCGCGTGCGCGGGGAGCACCTCGGCGGCGGGCTGATCGCGATGATCTTGTC 4459989
4459990GGGCTCATCCCCGCGTGCGCGGGGAGCACGCCTGGCTGGATGAGCAGCTGGGTCGGCAACG 4460050
4460051GGGCTCATCCCCGCGTGCGCGGGGAGCACTCGCCCATCACCGTCGCGAACCGGATCAAGAA 4460111
4460112GGGCTCATCCCCGCGTGCGTGGAGAGCACACCGTGATGGTCGTAGCCGTCTCGGCGGCGCT 4460172
4460173GGGCTCATCCCCGCGTGCGCGGGGAGCACGGGCGCGGACCCGGCCCACGACCACCTCGTCG 4460233
4460234GGGCTCATCCCCGCGTGCGCGGGGAGCACGCGGAAGCGACCGCGGAATTTCCGACCTCAAG 4460294
4460295GGGCTCATCCCCGCGTGCGCGGGGAGCACGAGCTGGTGGAGGTGATGCGGGAACGGCTGCC 4460355
4460356GGGCTCATCCCCGCGTGCGCGGGGAGCACGGACGGCACAACGCAGCCAGGTTCGACAGCCG 4460416
4460417GGGCTCATCCCCGCGTGCGCGGGGAGCACAGCTGTCGGAGCCGAAGGTGTGCGAGGGCGGC 4460477
4460478GGGCTCATCCCCGCGTGCGCGGGGAGCACGAAGAATGGCTGAGCGAGCACGAGGTAGCCGA 4460538
4460539CGGCTCATCCCCGCGTGCGCGGGGAGCACTCGCGGGCCGATTCGTAGTACGACTAAATAGC 4460599
4460600CGACTCATCCCCGCGTGCGCGGGGAGCACGGGGAGCAGGCGCAGCAGTGCGGTTGGGCCGC 4460660
4460661GGGCTCATCCCCGCGTGCGCGGGGAGCACTTGGTGGTTCTCGGGAGTGCGCGTCACTGCCTC 4460722
4460723GGGCTCATCCCCGCGTGCGCGGGGAGCACCATGCGCTCGATCTGCTTGACGGACATTACAA 4460783
4460784GGGCTCATCCCCGCGTGCGCGGGGAGCACCGCACGGTGTACCGCCGCGCCTGAGTGGCTGG 4460844
4460845GGGCTCATCCCCGCGTGCGCGGGGAGCACTAGCGGATCATGTCCGACTCCTTTGGATAGAG 4460905
4460906GGGCTCATCCCCGCGTGCGCGGGGAGCACCCCACGGGAATGTCCTCGCCCTGCGGCAGCCT 4460966
4460967GGGCTCATCCCCGCGTGCGCGGGGAGCAC4460995
Left flanking sequence : Till position 4459384 (length bp)
AGCCCAGCAGGCGGTTGGTGCGGTTGCCGCGCCGACCGAAGAAGGCGGTTCCGCGTGCGCGGGGGTACGA
CCTCGCCCAGCCCGAACGCGACCAAGTCGC
Right flanking sequence : From position 4460995 (length bp)
ACTTCCTGACCTGCATGTTCTCAGCCCACTACCCCAGTTTTCATTCACTTTCACCCAACTCACGCGCCGC
CATCCACCTCCTGATACATCACATCTCCGT
Print the CRISPR sequence : From position bp To position bp