Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_006361_13                                                                                                                 top


Strain : Nocardia farcinica IFM 10152 RefSeq :NC_006361 (chromosome circular)
CRISPR id : NC_006361_13
DR consensus (29 bp) : GGGCTCATCCCCGCACGCGCGGGGAGCACNumber of repetitions :9
Begin Position : 4584018 End Position : 4584533

4584018TGGCTCATCCCCGCACGCGCGGGCAGCACTCCGCGAGGTCGAACCGGCCGCTGAACACCG 4584077
4584078GGGCTCATCCCCGCACGCGCGTGGAGCACAAAGGCCACTACTTCGTCGGCGACCGGATCGG 4584138
4584139GGGCTCATCCCCGCACGCGCGGGGAGCACCAGCGGAGAAAGATGCCCCCGCCGCGTTGCAG 4584199
4584200GGGCTCATCCCCGCACGCGCGGGGAGCACACAGGGAGCGGACCGCTGCAGAGCTGCGGAAA 4584260
4584261GGGCTCATCCCCGCACGCGCGGGGAGCACGCTGGTGATGAACGGCGGGATGGCCACGGCGA 4584321
4584322GGGCTCATCCCCGCACGCGCGGGGAGCACACCACGATCCCCTGTGCCTGCCTACGCGCCTG 4584382
4584383GGGCTCATCCCCGCACGCGCGGGGAGCACCTCGCTCGTAGTACCCACCCACCCCCTGAGCC 4584443
4584444GGGCTCATCCCCGCACGCGCGGGGAGCACGCGCCCTGCCCGCGCCTGGTTCCACGCCAGCA 4584504
4584505GGGCTCATCCCCGCACGCGCGGGGAGCAC4584533
Left flanking sequence : Till position 4584018 (length bp)
TCTCGCCGGGCGGCCCTTCAAGAGATCATGGATCACGGGCCGGTTGGTCCTGACGCCTGTCCGCATCGCC
AGTCCGGCCAGTCGGTGGTGAAAAGAGCTA
Right flanking sequence : From position 4584533 (length bp)
ACTTCCTGACCTGCACGTTTCCAAGCCGATCACCCATTTTTCATTCACTTTCCGCACCCCCACCCGCCGC
GCGTTTCCGGGCGGCTCGGTGGTACCGGCT
Print the CRISPR sequence : From position bp To position bp