Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_006369_3                                                                                                                 top


Strain : Legionella pneumophila str. Lens RefSeq :NC_006369 (chromosome circular)
CRISPR id : NC_006369_3
DR consensus (28 bp) : GTTCACTGCCGCACAGGCAGCTTAGAAANumber of repetitions :13
Begin Position : 3246643 End Position : 3247392

3246643GTTCACTGCCGCACAGGCAGCTTAGAAAAGTACCACGGCACAAACACCGCCTGAAAGTTG 3246702
3246703GTTCACTGCCGCACAGGCAGCTTAGAAATACTACGTCCTTAGCTCTTAAGTCTTTTGTGC 3246762
3246763GTTCACTGCCGCACAGGCAGCTTAGAAATCTTGCGGCGCGTCTTTGTCTTCCATTAATTC 3246822
3246823GTTCACTGCCGCACAGGCAGCTTAGAAACAACAGACACGACAGGGTAGGGTTGCCCACAAA 3246883
3246884GTTCACTGCCGCACAGGCAGCTTAGAAAGCCATCATGATTACTAAAGTCGATTGTGACCC 3246943
3246944GTTCACTGCCGCACAGGCAGCTTAGAAACAAAGTGTACGGAGATAGACCGCAAGACGACA 3247003
3247004GTTCACTGCCGCACAGGCAGCTTAGAAAAATATAAAGCATCGGGAAAATGTAGACAAAAT 3247063
3247064GTTCACTGCCGCACAGGCAGCTTAGAAAAAATGCACGGCGCAAAAGTCAGAAAACAGCCT 3247123
3247124GTTCACTGCCGCACAGGCAGCTTAGAAAAGACAGAAATCCGGCTGGGCTAGAAATGATGA 3247183
3247184GTTCACTGCCGCACAGGCAGCTTAGAAATCTTGCCTGCTCTTAACTACAACTCCAGACCA 3247243
3247244GTTCACTGCCGCACAGGCAGCTTAGAAAAAACAACCACACCTCCCTTTTTAGTTAATCTA 3247303
3247304GTTCACTGCCGCACAGGCAGCTTAGAAAGATTCGATACATTTTTTAACTCGTCGCCCCAGT 3247364
3247365GTTCACTGCCGCACAGGCAGCTTAGAAG3247392
Left flanking sequence : Till position 3246643 (length bp)
GTATTTGATGTAGCGGATTTAATCAAGGACGCCCTTATTCTGCCTTGGGCATTTATCTGCGCCAAGGAAA
ATAGTAGCGAACAAGAGTTTCGCCAGCTAA
Right flanking sequence : From position 3247392 (length bp)
TTATTATGTTAAAGGTATTGGCACGCTACGTAGCAAGGTCAGGCCTTGGTACGACCTTGTTTTGATTAGG
AAAGTCTAATTATGACTATAATCTCCATTT
Print the CRISPR sequence : From position bp To position bp