CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_006392_3
Flanking alignement tool
Page manual
  
Home Page
NC_006392_3                                                                                                                 
top
Strain :
Haloarcula marismortui ATCC 43049
RefSeq :
NC_006392 (plasmid pNG400 )
CRISPR id :
NC_006392_3
DR consensus (30 bp) :
GTTACAGACGGACCCTCGTGGGGTTGAAGC
Number of repetitions :
52
Begin Position :
46654
End Position :
50046
46654
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GTGGCACCGGTTGAGTCGCTGACCGCCGGCGCGTACGC
46721
46722
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CTGTAGGCCGCCAGCACGAGCACGGCCCAGAGCGG
46786
46787
GTTACAGACGGACCCTCGTGGGGTTGAAGC
AGACCCTCCCCTCGTGGATGCACTCGGCACAGTAGC
46852
46853
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CGGCTCTGAGTATGAGGGAGTCCTGTTCAGCCAAGA
46918
46919
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GTGGTGAAGTCGCCCGCAGCGTATTCGAGCTTGTCCT
46985
46986
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CTGCGGCGGCTGTTTGAGTTGTACCTTTCGCTGGTC
47051
47052
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GACTGCCGGAACCAGAATACCGGCACAAAGTACGAG
47117
47118
GTTACAGACGGACCCTCGTGGGGTTGAAGC
ATCGACTGCCCGAGAGACCCATGATTGCGAATAGT
47182
47183
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GCCGCAACGAAGCCCGGCAGGAACTGGGGCGTGACGA
47249
47250
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TCGAAGAGCGCGATCGGGGCGAGAGGTTTGACGTGC
47315
47316
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GCGTTGGTCGAGTTTGACCGTGCCGTAGATTGTCGCG
47382
47383
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TCCGAGACGATGCACGCGCTTGCCCAGCAGTTGTG
47447
47448
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GACCCACAGGAAACACTTTTCGCCTCACCAACTCTG
47513
47514
GTTACAGACGGACCCTCGTGGGGTTGAAGC
AACCCACTCACGGCGGCGAAGGACGCGCTGACGATC
47579
47580
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GGCCGGCACGGCGTCACGCGAGAGATGTGTCCTTGC
47645
47646
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GGATCACGGTACAGATGCGGCGACAACTACGCGAA
47710
47711
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GGAAACATCTACGCGCGCACCAGCCTGCTCGGAAACT
47777
47778
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TGGTACTCCTCGCGCGTGGTGGGGTACGAGGCCGTCG
47844
47845
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CCCGACGGCGGCGACGGTATCCCGGAGGACAAGACC
47910
47911
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TGCCATATCCACGAGCCCTTTGACATCGCCGTCCTG
47976
47977
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GAGCAAGACGAGTGGCTCCAGTTCCCGACCGCCGC
48041
48042
GTTACAGACGGACCCTCGTGGGGTTGAAGC
AAACAGCGCGAGGATATTGTTCAGGCCGTCGAACAGG
48108
48109
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TTCGACCGCTTCGGCGGCTGGGAATGGTCGTCGACT
48174
48175
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CTGATATGTACTGCTAAGAGGTCATCTCGGATACC
48239
48240
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GTACTCGTCACACCACGGGCACACGCCGTCGTCAATC
48306
48307
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CAGTGGGACGTGTTCGGCCATGCCGTAGATAGACAG
48372
48373
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TCTACTACCCTATCGACGACGCCGAAATTTCGCCCA
48438
48439
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TGGACGGCCTCCGCACTGTCCTCACCATCGTCCTC
48503
48504
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TTGATTGAACTATCCACGTCGCGTTTGTGTGCCTC
48568
48569
GTTACAGACGGACCCTCGTGGGGTTGAAGC
ATGAGGTTGTTTGGGACACTGCTATTCGGCCGCG
48632
48633
GTTACAGACGGACCCTCGTGGGGTTGAAGC
ATCGCCACACTCCCCAGCGCGGTCAGCAGCCCGACG
48698
48699
GTTACAGACGGACCCTCGTGGGGTTGAAGC
AACGACCGGTACATGATTGAGTGGCGCGAGGGTCCG
48764
48765
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GACGGCGTCGACTGTGGGTCACTGTTACCGTCGC
48828
48829
GTTACAGACGGACCCTCGTGGGGTTGAAGC
ATCCGCAGTGGGCCCGATGACATCTACGTGTATCCGG
48895
48896
GTTACAGACGGACCCTCGTGGGGTTGAAGC
AAGAACGATATGGGTGTTAGGTCGCACCATTCGCAGA
48962
48963
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GACTACGTCTACCCCGAGGAGGAGGTGCGCGACTGG
49028
49029
GTTACAGACGGACCCTCGTGGGGTTGAAGC
ACCATAGTACCATCATGGCACTCTGGACTTATAGT
49093
49094
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CTGGAGCGCATCGTAGTGCACGCCGCGGTCGTTCGCTC
49161
49162
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TCGACACCATCAACGGGTTGCTCGGCGACGGGACG
49226
49227
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CCCGCCCACTTGTTGCTCATGTAGACCTTTCCTGAC
49292
49293
GTTACAGACGGACCCTCGTGGGGTTGAAGC
ACACTCTCGCACTCGATCCCGGACCTGCTGGGATC
49357
49358
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CCGTCGAAGGACCGCCTTGGGTGGTGTACTCGGCGG
49423
49424
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TTGCGGACCCGGCGGCGATGGACGACGATGTCGGC
49488
49489
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CATTAGCGAGATTAGCGGTATGGGTTCCATCATCCCA
49555
49556
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GAGGACAGCGTCTTTGTGGTCCGCCAGTTTGGACGGGT
49623
49624
GTTACAGACGGACCCTCGTGGGGTTGAAGC
TGGACGAGCGCCCAGCCGTCCTTGTTGCTACGGAATA
49690
49691
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GAATTTGTTGACGACCCACGGGAGACCGACGATGC
49755
49756
GTTACAGACGGACCCTCGTGGGGTTGAAGC
CACTTGCTCAATCAGGGACTGCGTTGGTATGGCCT
49820
49821
GTTACAGACGGACCCTCGTGGGGTTGAAGC
AGCACATAGTCGATGCTCGGGTCGTGCCAGTGGCCG
49886
49887
GTTACAGACGGACCCTCGTGGGGTTGAAGC
GTCGCCGACGACGACCCGTTCGTCCTTCCCGAAAGC
49952
49953
GTTACAGACGGACCCTCGTGGGGTTGAAGC
ACCGCTATAACAATGAACATCCAATACTACGTTA
50016
50017
GTTACAGACGGACCCTCGTGGGGTTGAAGC
50046
Left flanking sequence : Till position 46654 (length
bp)
TTTCGTCGACCCCCGGGGGGTTGCGGGGGTATTGGCGGTCGACGAAAATAGTGAAGTGAAACCAGGCTAG
AAATAGGCTGTGTCCCGGAAATCGGGCATG
Right flanking sequence : From position 50046 (length
bp)
CGATAATACTGTGA
Print the CRISPR sequence : From position
bp To position
bp