CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_006462_9
Flanking alignement tool
Page manual
  
Home Page
NC_006462_9                                                                                                                 
top
Strain :
Thermus thermophilus HB8
RefSeq :
NC_006462 (plasmid pTT27 )
CRISPR id :
NC_006462_9
DR consensus (37 bp) :
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACG
Number of repetitions :
13
Begin Position :
227324
End Position :
228238
227324
TGGCCAATCCTCTACGAGGCTAACGAGGTTTGCAACC
ATCGCTGTTCACCCTCCTTTCGGCCTTCATCCTAT
227395
227396
GTTTCAATCCTCTACGAGGCTGACGAGGTTTGCAACT
CCCAAGGGGGGGCTTCACCCCGCGAACAACGCACTCGCC
227471
227472
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACG
GGGCTCACCCCCCAACCCCATACCCCCCCGGATGG
227543
227544
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACG
GAGTCCGGCGATGAGGGCGTAGAAGCGCCCATTCCT
227616
227617
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACG
CGGATAGGGCATAGCGATAGGGTGGCCGTAGTGGG
227688
227689
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACG
GGTACATCACATGGGCGGACGTGGTGAAGAGGAGG
227760
227761
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACC
CAAAAGACCAAAAGGGCGATAAGGATGCTTATCACTCA
227835
227836
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACC
AGGAGGGCCGCCGGGGAGTAGCTGGGCTGGGCCCG
227907
227908
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACG
CTGGTGGACGAGCTGGCTGAGGGGCTTCCCAAGCC
227979
227980
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACG
GAGGCCCCCCTGGACTGGAGAGAGGGGTATCGGCT
228051
228052
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACG
TGGCAGCGGTGCCAGATTGACAACGTGGACTACAAC
228124
228125
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACA
GGATTAGGTTGTGCTGTTCAGCCTCCCTTTCCACAACCCA
228201
228202
GTTTCAATCCTCTACGAGGCTGACGGGGTTTGCAACG
228238
Left flanking sequence : Till position 227324 (length
bp)
GGTTTGACGACCGGGTACATGTATCTTGCCCCCTGATCCCCGCCGCACAGTATCCCGGTCGTCAAAGACC
GCATCCACATGGAAGGCCCACAGGGTCGGG
Right flanking sequence : From position 228238 (length
bp)
GCCCCCTCCAGGAAGCGGCTCCAGGCGGGGGGTCTTGAGGCCATTTTCGCACGCGGGGGGATTATGCGTC
AACCTGGAAGAGGAGCCGTGGGACTAAAGT
Print the CRISPR sequence : From position
bp To position
bp