Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_006582_7                                                                                                                 top


Strain : Bacillus clausii KSM-K16 RefSeq :NC_006582 (chromosome circular)
CRISPR id : NC_006582_7
DR consensus (32 bp) : ATTTCAATCCACGCACTCATATAGAGTGCGACNumber of repetitions :9
Begin Position : 3741040 End Position : 3741603

3741040CTGTTTTTCCACGAAGTCATAAAGAGTGCGACAGGTACAAGCTGCTGCTACGATGGAGTGCTTAAA 3741105
3741106ATTTCAATCCACGCACTCACGAAGAGTGCGACACATCGATCCAAAATCCTTCAAGACTTATAAAAGG 3741172
3741173ATTTCAACCCACGCACTCACGAAGAGTGCGACTGACGTATGAAATACGCAGCACGTTCGCCACAAAA 3741239
3741240ATTTCAACCCACGCACTCACGAAGAGTGCGACTTTGGCTTCTGCTTTAGTCTTAAAACCGCGTTTT 3741305
3741306ATTTCAACCCACGCACTCACGAAGAGTGCGACCATAATAAGACGTAAGACATGCGGTGTCTCGTCGA 3741372
3741373ATTTCAACCCACGCACTCACGAAGAGTGCGACCAGCTTTTCGAATGATACAGTAGTCAAGACCCAC 3741438
3741439ATTTCAACCCACGCACTCACGAAGAGTGCGACGGTACCGTCTTCTATTCCATTAGCGCATAATTCAG 3741505
3741506ATTTCAATCCACGCACTCACGAAGAGTGCGACCAAAAAGTGGATTGTCTTTGTCTTTGTCTGAGTA 3741571
3741572ATTTCAATCCACGCACTCACGAAGAGTGCGAC3741603
Left flanking sequence : Till position 3741040 (length bp)
TTATCCACTCTTCCTTACTCAGGTTTAAAGGATCTTGGTTATGCCAAGTCATATAAAATTTCACGTCCTC
TGTATTTACTTAGTACATAACCGATATTTT
Right flanking sequence : From position 3741603 (length bp)
AGCGGAAATCCTCTAATTAAAAGGGAAAAAAAGCTCTTAAAGTAGGAAATCTTCATTGATTCTACTCTAA
TCCTTTAAAACCAATAACATCTTTCTTCAA
Print the CRISPR sequence : From position bp To position bp