Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_007413_15                                                                                                                 top


Strain : Anabaena variabilis ATCC 29413 RefSeq :NC_007413 (chromosome circular)
CRISPR id : NC_007413_15
DR consensus (35 bp) : GTGCTTTAACATTAGATGTCGTTAGGCGTTGAGCANumber of repetitions :3
Begin Position : 4334197 End Position : 4334375

4334197GTGCTTTAACATTAGATGTCGTTAGGCGTTGAGCAGGGGGCTGGGTCATCATATTGATCTCGCTCAGTCCGG 4334268
4334269GTGCTTTAACATTAGATGTCGTTAGGCGTTGAGCAACGATCGCAACCCTTGATTCATGAAATGCTTGGTAGC 4334340
4334341GTGCTTTAACATTAGATGTCGTTAGGCGTTGAGCA4334375
Left flanking sequence : Till position 4334197 (length bp)
ATGAATAGCTATTAATTTTTGCAACTTGGCTAACCTTAAAGAGTAGGTGCTTGTAAAATTGATGTAGAGC
TTAGGCAAGTCAGCAAATGTGGCTATCGCT
Right flanking sequence : From position 4334375 (length bp)
GGATTCCCAGAGGCGAATGTATTTACGGGTTATTGTCTTTGCTAGAAATATGTTGTCAGTGAAGCCAAGA
TTAGCCCTCTTGATTACCATCATTCCGAGA
Print the CRISPR sequence : From position bp To position bp