Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_007432_1                                                                                                                 top


Strain : Streptococcus agalactiae A909 RefSeq :NC_007432 (chromosome circular)
CRISPR id : NC_007432_1
DR consensus (36 bp) : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACNumber of repetitions :15
Begin Position : 986377 End Position : 987336

986377GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAATCGATCTGGTCAGTTTAATACGCCTTA 986442
986443GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATCTGAAAACCCTTGATACATATAGGTTTT 986508
986509GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCCACCAGTACCACCAGCAACTAATAAATG 986574
986575GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGACAGATGAAACAAAAAAAGTCTACCTAA 986640
986641GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATGATATCATCGGCTTCATAATGTTCCAAT 986706
986707GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCTGCTACTAACTCATCTGGTGTAACTTGTT 986772
986773GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACGGGTCCAAATCAGCAATCTATGCTAAAAAT 986838
986839GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCAACCCTATGTTTGATAATATTTTAGACGT 986904
986905GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAGTGAAGTTGAATTTTATTTGAGATACTA 986970
986971GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAGTGCCACAGTTTGTGGCTGATTGGATTG 987036
987037GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACCATTCAAGGACTACCCTCAACAGTAACTCT 987102
987103GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTCTATCTTCTGAAGATATTTCACAAGTGA 987168
987169GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCAGCGAGATGCTCTAAGTAAGCATGTTGA 987234
987235GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTCTTCTTTTTAATTCTTCTAACACTCCATC 987300
987301GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC987336
Left flanking sequence : Till position 986377 (length bp)
TATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATT
ACGAAAGCTCAAAAGAAAATTTTCTACGAG
Right flanking sequence : From position 987336 (length bp)
ATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGT
GGTGTTCTAGTTTTTTGTTATACTGAAATA
Print the CRISPR sequence : From position bp To position bp