Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_007776_8                                                                                                                 top


Strain : Synechococcus sp. JA-2-3B'a(2-13) RefSeq :NC_007776 (chromosome circular)
CRISPR id : NC_007776_8
DR consensus (37 bp) : GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACNumber of repetitions :16
Begin Position : 1428062 End Position : 1429246

1428062GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACGAGCCATACTTCGACGGTGAAAAGGTGTACTGTAACGG 1428136
1428137GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACAGGAAGTTTAACCGTAAGGTTGCTAAATCCGCAACTGTG 1428212
1428213GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACTCATTACCTTAACGTGGAGCGGGGTTTAGGTAGCCGTGGCGATA 1428293
1428294GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACTTAGCGTGCTACCCGCCACTGCCCACGCTGGTGGGTATTTTAT 1428373
1428374GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACGTACGCCCGAGAGGGGTGCAAAAAGGGCGGTATGAGTA 1428448
1428449GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACGTGTTCACCTGTCGAAGCCGTTCGGTCTGCGGGAAGTCTCCC 1428527
1428528GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACGACAGCAATATTCTGTACCAACAAATGGAAAGAACAT 1428601
1428602GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACTGAACTAGTCTTATATAAGGAGTGCCTACCTCAGGC 1428674
1428675GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACGCCTACCTCAGGCACTCCTTTATTTTTTAGAGCAGGT 1428748
1428749GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACAGCGAAGGAGCGGATCCGCAAGGCGAAAGCCCGCGGATTCCGC 1428828
1428829GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACCTCGGTGTACCAGGTTACTGTCTTTCGGCACCTAGAAACCGGAGCC 1428911
1428912GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACATGGTGTTGACGGTAGCGGTGGTCGCTGGTACGATAGG 1428986
1428987GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACGTCCGGTCGGCGGCATTGGGGATCCACGCGACGTCGCGTCT 1429064
1429065GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACGGGTGGAGGTAAGTTTCTGTAGAGTTTACCGTTTACT 1429138
1429139GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAACCCGGTTCGCCGCCAAGCAACCTCACTGTGGAGCA 1429209
1429210GTTTCCGTCCCCTTGCGGGGAAAAGGTAGGGATCAAC1429246
Left flanking sequence : Till position 1428062 (length bp)
GGATCCACCCTAGAATCCGCCAGTCTCAGTTCTCAAGGATGTCTCGAAGAAGGCAGGGATCAACTTTCCT
TTCTCTCTCCTCTCGCCTCGCGTAGCTCAG
Right flanking sequence : From position 1429246 (length bp)
CCTACCCCCGGAAAAGCTTGAATCCATGCAGTTTTCAAGGTGCGTTCGCGAGGGAGTACGGAGACTTCGT
GACATAGATGTTAACATTGCTCTTGGGGAT
Print the CRISPR sequence : From position bp To position bp