Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_008344_1                                                                                                                 top


Strain : Nitrosomonas eutropha C91 RefSeq :NC_008344 (chromosome circular)
CRISPR id : NC_008344_1
DR consensus (38 bp) : GTTTCAATCCTCGCCCAGTCGGGTGACCGGGCGCTACANumber of repetitions :3
Begin Position : 1044708 End Position : 1044890

1044708GTTTCAATCCTCGCCCAGTCGGGTGACCGGGCGCTACGTGTAAGTACGCTTGCCGCCAACACAATCATTGTCGG 1044781
1044782GTTTCAATCCTCGCCCAGTCGGGTGACCGGGCGCTACAATTTGTAAATAAAAAAAAATTAATTGGCAATGC 1044852
1044853GTTTCAATCCTCGCCCAGTCGGGTGACCGGGCGCTACA1044890
Left flanking sequence : Till position 1044708 (length bp)
TCGCGCCAGGTTGTATAGTCACTTCCAACGGATTGAGTAGCGCCCGGTCACCCGACTGGGCGCTACTCAA
TCCCGGCGCGCTCCACCGGATCATTCTCAT
Right flanking sequence : From position 1044890 (length bp)
GTACAGTTACAACTTCTTGATACATCATCAAAATTCGAGCAGTTTGCGCGAACATGAGATTTTCCTTGAC
TGCATGTAACAGATAAAAGGAGGGGTAAAT
Print the CRISPR sequence : From position bp To position bp