Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_008463_3                                                                                                                 top


Strain : Pseudomonas aeruginosa UCBPP-PA14 RefSeq :NC_008463 (chromosome circular)
CRISPR id : NC_008463_3
DR consensus (28 bp) : TTTCTTAGCTGCCTACACGGCAGTGAACNumber of repetitions :22
Begin Position : 2935917 End Position : 2937205

2935917TTTCTTAGCTGCCTACACGGCAGTGAACTGGATTCATGTATCAGGCATCGTACTCGGCAA 2935976
2935977TTTCTTAGCTGCCTACACGGCAGTGAACCAGGTAGACGCGGACATCAAGCCCGCCGTGAA 2936036
2936037TTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCT 2936096
2936097TTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGAT 2936156
2936157TTTCTTAGCTGCCTACACGGCAGTGAACAACCGCGCGCAACAGCTGTGCATCGTCACCTT 2936216
2936217TTTCTTAGCTGCCTACACGGCAGTGAACCGTCTCGATGCTGCCGTCGATGAGCGTCTTGT 2936276
2936277TTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTT 2936336
2936337TTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCT 2936396
2936397TTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCATCCGCGCAC 2936456
2936457TTTCTTAGCTGCCTACACGGCAGTGAACAACAGAACCGCGCACCTCGATCAGCCTCGCAT 2936516
2936517TTTCTTAGCTGCCTACACGGCAGTGAACGTAAATCCAGCGCCTGGGCTGCGCATTGTCCA 2936576
2936577TTTCTTAGCTGCCTACACGGCAGTGAACCACGCAGCCAGGCTCGAACATCGGCCCGGCTT 2936636
2936637TTTCTTAGCTGCCTACACGGCAGTGAACTACTACGACGACGCTTTGCAGGCTGATATTCA 2936696
2936697TTTCTTAGCTGCCTACACGGCAGTGAACACGACGCGACCAGAATCGCGATTTGCACCCAC 2936756
2936757TTTCTTAGCTGCCTACACGGCAGTGAACGCGCTGACGCCGCATTCGGCGATCTGCTTCGT 2936816
2936817TTTCTTAGCTGCCTACACGGCAGTGAACCGGGCGCTTGCGCCGGATCGGCGAATTGGATG 2936876
2936877TTTCTTAGCTGCCTACACGGCAGTGAACCCGGGCTGGATGGACTCGAAGGGCGCCAGGCT 2936936
2936937TTTCTTAGCTGCCTACACGGCAGTGAACGACCAGATCCTGCCGCAGTACTGGCAGGACCG 2936996
2936997TTTCTTAGCTGCCTACACGGCAGTGAACGTCGCAGCCACTGTGTCGGCCAAAACCAGGTC 2937056
2937057TTTCTTAGCTGCCTACACGGCAGTGAACTTGACGAACGCCGTCCAGAAGTCACCACCCGGC 2937117
2937118TTTCTTAGCTGCCTACACGGCAGTGAACACCGCGCTCGACTACTACAACGTCCGGCTGAT 2937177
2937178TTTCTTAGCTGCCTACACGGCAGTGAAC2937205
Left flanking sequence : Till position 2935917 (length bp)
TAGGAACTTTATATTCGGATGTTTGGTAGTGGGATGGGGAGGGTGGTTCTGCCTAGACGGCAGCGAACCC
GGCGGCTGTTGTGGCCGAGGTGGGTTCGAG
Right flanking sequence : From position 2937205 (length bp)
TAGCTCCGAAAACCTATAACCATTTGAAGGAAAAAGAAATACCGAGTTTTTCCCGCCAGAAACCCTCTTT
TTTCGAGGTCTCGTAACTTGCTGATTTATA
Print the CRISPR sequence : From position bp To position bp