Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_008526_2                                                                                                                 top


Strain : Lactobacillus casei ATCC 334 RefSeq :NC_008526 (chromosome circular)
CRISPR id : NC_008526_2
DR consensus (28 bp) : GTTTTCCCCGCACATGCGGGGGTGATCCNumber of repetitions :21
Begin Position : 356874 End Position : 358122

356874GTTTTCCCCGCACATGCGGGGGTGATCCCTTCTCTGACTGGCTTACCGCTTCTTTGCATTT 356934
356935GTTTTCCCCGCACATGCGGGGGTGATCCCGCTTTTATAACATTTATGCCGCATAAAAACAC 356995
356996GTTTTCCCCGCACATGCGGGGGTGATCCCTGGCGACAATTCGATTTCTAAACGTACTACCG 357056
357057GTTTTCCCCGCACATGCGGGGGTGATCCCTGGCGACAATTCGATTTCTAAACGTACTACCG 357117
357118GTTTTCCCCGCACATGCGGGGGTGATCCCCAGCCATTGTAATTCCTCCTAATGCGAATTTC 357178
357179GTTTTCCCCGCACATGCGGGGGTGATCCCGCGTTTGATGATGGCAGCGCGGCAACTTTAAC 357239
357240GTTTTCCCCGCACATGCGGGGGTGATCCTCAAAATCGCGACCTGGTTCAAAATGCGGCTGA 357300
357301GTTTTCCCCGCACATGCGGGGGTGATCCTGCTCGTGCGGTGTCTGGAGTTGCTGGCAAGTA 357361
357362GTTTTCCCCGCACATGCGGGGGTGATCCCTATATTTAGCTCAATTGCAACAAGAGGGCAAA 357422
357423GTTTTCCCCGCACATGCGGGGGTGATCCCGACAATAACGAGCTTGCGCTGATGGCAACTTT 357483
357484GTTTTCCCCGCACATGCGGGGGTGATCCCAAGCGAGTCCGATCCTCCCGTATTGTGAGCAT 357544
357545GTTTTCCCCGCACATGCGGGGGTGATCCTGGCTGTTAGTTTGGCCAGTGTTATAAGCCGCA 357605
357606GTTTTCCCCGCACATGCGGGGGTGATCCCAACTGGTGCGGTAATCGGGCGGAAATTGTTAA 357666
357667GTTTTCCCCGCACATGCGGGGGTGATCCCGATATTATACCGGTGTTTTTACCGGTTCTCCT 357727
357728GTTTTCCCCGCACATGCGGGGGTGATCCTGAGTTTGGTATCACGCTCTTTTGTGGTCGTCAG 357789
357790GTTTTCCCCGCACATGCGGGGGTGATCCTAAATGTACTTCTTCCACCACGTGGCACTATAA 357850
357851GTTTTCCCCGCACATGCGGGGGTGATCCTGCCGAAGTTGAAGACATGGGTCAGGCTTTTGC 357911
357912GTTTTCCCCGCACATGCGGGGGTGATCCCGACCAAAGCCAAACCAACACAGGCGAATACAA 357972
357973GTTTTCCCCGCACATGCGGGGGTGATCCTAAGGTTGTCAACACGGCTTATGCCAACAAGGA 358033
358034GTTTTCCCCGCACATGCGGGGGTGATCCCGACATCATCAAGGATTGCCAGTTCAACTTGGG 358094
358095GTTTTCCCCGCACATGCGGGGGTGATCC358122
Left flanking sequence : Till position 356874 (length bp)
CGTTGTCTGATGCGACGGCAACAATGGCACTGGCGGACAAACTCATAAAAAAAGGGATCTTAACGATTGG
CAAACGTTGATGGGATAGGGATTTTTTAGT
Right flanking sequence : From position 358122 (length bp)
TACCAGCACGGGGTTACCATGTCAACCCTTTTTGTTTTCCCGTATGTGTCAAGTCTTTCTCGGTTCCACT
AATTGAACTATTCTTTTTTGCTCGACTGCC
Print the CRISPR sequence : From position bp To position bp