Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_008698_1                                                                                                                 top


Strain : Thermofilum pendens Hrk 5 RefSeq :NC_008698 (chromosome circular)
CRISPR id : NC_008698_1
DR consensus (25 bp) : GAAGCAACTGTGAAAGCATTGAAAGNumber of repetitions :12
Begin Position : 1219331 End Position : 1220080

1219331GAAGCAACTGTGAAAGCATTGAAAGGTAAGTAACGTTGGCAGTTACGAGGTAGCCCCGCGGAGCCC 1219396
1219397GAAGCAACTGTGAAAGCATTGAAAGTCTCCTCAAGCTTCTCCGCCAGTTGCCCGATCCTCTC 1219458
1219459GAAGCAACTGTGAAAGCATTGAAAGGAGGCACTGCTGGAGGCGGCCAGGGTGCTCAACGTCAGCG 1219523
1219524GAAGCAACTGTGAAAGCATTGAAAGGCTCATTACGCCTCACCCACCAGCAATGCGGCTTGGTAGACT 1219590
1219591GAAGCAACTGTGAAAGCATTGAAAGTTCGAGCAAATGAGCGTGGACGAGCTGCGGCAGGAAGTGCTGATGTGG 1219663
1219664GAAGCAACTGTGAAAGCATTGAAAGAAGTTTCACTCTTTCGAGCTCGTCGGTCGTCTTCTTTAGTAT 1219730
1219731GAAGCAACTGTGAAAGCATTGAAAGTTACGTATGAGTTCATCGACACCGGCAAGCAGGTTCAC 1219793
1219794GAAGCAACTGTGAAAGCATTGAAAGACCAGGACCGAGAGCCGCTGCTCCAGCTCCGGGCTCAA 1219856
1219857GAAGCAACTGTGAAAGCATTGAAAGTTCGGAGGGATTTCCCAGCGGTTGCGACGTCTATTGCACGGA 1219923
1219924GAAGCAACTGTGAAAGCATTGAAAGTTACTCGCCAAGCGCTGTGAAAGGCTCGGCGCAGTGGGG 1219987
1219988GAAGCAACTGTGAAAGCATTGAAAGGGATATACGCCACGGAGGAGGTCGCCAGGAGCCTCGGCTCCGC 1220055
1220056GAAGCAACTGTGAAAGCATTGAAAG1220080
Left flanking sequence : Till position 1219331 (length bp)
TCGAAGCTTCTCATGCGTGAATTTTGTCAAAGAGGCAGTTTTGCAGACTTCGACTCATTGAGAAAAGGAT
TTATAGACCCTCAACCGTAGAAAGTGGTCG
Right flanking sequence : From position 1220080 (length bp)
GCTCGTGCTCGCCGTGTAGCTTCCGTTACTGGTCTTCGACGCGTTGGCTCTGTCGTGGCCCGGAGGCTTC
GCGGTCTCGGTGGGGCACAAGGCTTTGGGG

Print the CRISPR sequence : From position bp To position bp