Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_008750_5                                                                                                                 top


Strain : Shewanella sp. W3-18-1 RefSeq :NC_008750 (chromosome circular)
CRISPR id : NC_008750_5
DR consensus (28 bp) : TTTCTAAGCCGCCTGTGTGGCGGTGAACNumber of repetitions :26
Begin Position : 2522578 End Position : 2524105

2522578TCTACAAGCCGCCAGTGCGGCGGTGAACTTGAATTTTTAAATACTTCACCTTCTCTTGTG 2522637
2522638TTTCTAAGCCGCCTGTGTGGCGGTGAACGTGTTAGGTGGTAAAACGCTACTCATAGAGTC 2522697
2522698TTTCTAAGCCGCCTGTGTGGCGGTGAACCAAATTGAAATGGAGAACAAGTACCGCCAGTA 2522757
2522758TTTCTAAGCCGCCTGTGTGGCGGTGAACACCAAAGCGATTGCTAAAATCACGGCTGTACA 2522817
2522818TTTCTAAGCCGCCTGTGTGGCGGTGAACAGGTTGTACATAGCGGTGTAGTTTATCCCCTA 2522877
2522878TTTCTAAGCCGCCTGTGTGGCGGTGAACTAGCGATTGCAGATACCTATCTTGTTCAGTTA 2522937
2522938TTTCTAAGCCGCCTGTGTGGCGGTGAACTCGTATTCGACCAGTTCGAGTTTCCGACCAAT 2522997
2522998TTTCTAAGCCGCCTGTGTGGCGGTGAACGTCATAATCTTAAGCTCGTCGTACTGCCAGAT 2523057
2523058TTTCTAAGCCGCCTGTGTGGCGGTGAACGCCAGCTTGACGCCACCTTGTGGGCGGCTGTA 2523117
2523118TTTCTAAGCCGCCTGTGTGGCGGTGAACCGAATCGCCGTTTCAACGTGCTTTTTCATGAA 2523177
2523178TTTCTAAGCCGCCTGTGTGGCGGTGAACGAATTAAGTGATGCCGCCATTTGCAGCGGATC 2523237
2523238TTTCTAAGCCGCCTGTGTGGCGGTGAACGCCATTGTGACAAAAATAAAACAGGCTGGAAT 2523297
2523298TTTCTAAGCCGCCTGTGTGGCGGTGAACTCGCTTTATTCTTCAATTAATACCATTTGTGA 2523357
2523358TTTCTAAGCCGCCTGTGTGGCGGTGAACGTTGAAATGGTTCAACTAGGCATGGCACCAAT 2523417
2523418TTTCTAAGCCGCCTGTGTGGCGGTGAACTAGCCGCAACAGCTAAAACCGCAGCACCAACA 2523477
2523478TTTCTAAGCCGCCTGTGTGGCGGTGAACAGATATGAGAACAGCTTTAGGTCAAACAGCTA 2523537
2523538TTTCTAAGCCGCCTGTGTGGCGGTGAACGAGCAGTAAAGGTGCAGTCAATTTGCTTTATT 2523597
2523598TTTCTAAGCCGCCTGTGTGGCGGTGAACAATATTTTCATATTAGTTTCCAAATAAATTTT 2523657
2523658TTTCTAAGCCGCCTGTGTGGCGGTGAATGGTATGGGTATCAATCGCCCATGGGTGTGATC 2523717
2523718TTTCTAAGCCGCCTGTGTGGCGGTGAACATTGTGATTATGCCCGTCTAGCTTATACAGAC 2523777
2523778TTTCTAAGCCGCCTGTGTGGCGGTGAACCAAACGGTAACGCTAAACCCTGTTGCCAAATC 2523837
2523838TTTCTAAGCCGCCTGTGTGGCGGTGAACAACCTTCAGCAATTGCCATAATTGCTTCACCT 2523897
2523898TTTCTAAGCCGCCTGTGTGGCGGTGAACGTCTCACGCCATGTTTCGAGGTTTTGCCAATC 2523957
2523958TTTCTAAGCCGCCTGTGTGGCGGTGAACACAAAAGCGGTCGCTGCAATGGTGGCCGTGGT 2524017
2524018TTTCTAAGCCGCCTGTGTGGCGGTGAACAGTAAGAGAATTTGAGCTTCATAATGTTCAAT 2524077
2524078TTTCTAAGCCGCCTGTGTGGCGGTGAAC2524105
Left flanking sequence : Till position 2522578 (length bp)
AAAGTTAAAAGGGAGTTCGAAGCATTATGCTGATTTAAGATAAGACTACAAGTTAACAACGACATTAACG
CCAATATTAGCACTCACCCTTACCGCTATA
Right flanking sequence : From position 2524105 (length bp)
AATAGCTTATCTGCAAAAAAATAAGTTACAACAGGCAGATAGGTAAAAAAACGTACTTTTACCTTTCTAA
ATATCAACTGTTGTAACTTTTTGTTTTAAA
Print the CRISPR sequence : From position bp To position bp