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CRISPRs details
NC_009012_5
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NC_009012_5                                                                                                                 
top
Strain :
Clostridium thermocellum ATCC 27405
RefSeq :
NC_009012 (chromosome circular)
CRISPR id :
NC_009012_5
DR consensus (37 bp) :
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
Number of repetitions :
43
Begin Position :
3813209
End Position :
3816348
3813209
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
CTTTTTTTATCTCGTTATCTTCACCGTCTGTGTATC
3813281
3813282
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATTTCTCATATTCAATTTTTACCTTTTCCATTTTTTA
3813355
3813356
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATCTTGGGGTGCAAGAGGTCGCTGGTTCAAATCCAGTCAC
3813432
3813433
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATGGGCATGCTCATATGGTGTATCCCTCAACGCTATA
3813506
3813507
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
CTATCTGTTGCGATTCTCCGCCACTGGGATTATCACC
3813580
3813581
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATTCACAAAATCAGCACTCAAGATGGGAAGTGACTTG
3813654
3813655
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATCATACTACCCATAAAACCTTCTAATTGCTTTAGC
3813727
3813728
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
TTTTCCTTACAATTGTTAAACATCCAAATATCGTCAT
3813801
3813802
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
CGCACATTTCTATCCCTATACTGTTGCGGTTGGTAA
3813874
3813875
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
TATGTATCATAATGCACGTGGCACTAACTGTAAGACTT
3813949
3813950
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ACGACAACATGAGAAGAAAAGGGGATGAAGCACAGA
3814022
3814023
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
TCTTCTCTTAAAGCACTACCAGTATCTTCTACTATT
3814095
3814096
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
TTGTATGTATTTTATTAATATAGTGTGCTTGTAATT
3814168
3814169
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
GGATTTGTCAAGTCTGCTAAAATAGCGGGCGGCAAAA
3814242
3814243
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
CCTTCTCCCCATTTACCACCGGGCAAATTAACTGTA
3814315
3814316
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
GTTAATCCCAAATTATGCTCAAAAGAAAAAAACCAA
3814388
3814389
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
AATATTGGAATCCAAAATAACCTTCAATTTTCCACCA
3814462
3814463
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
GTGACGTTTTGGCGTCTATTGAAAATCTAGGATAT
3814534
3814535
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
TTTCACATGCATAATATGTGAAATAGCGACCGAACA
3814607
3814608
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
AACCTCCTTTTTATATTTCTGGATCATCATCATAA
3814679
3814680
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
CAGTATTGCATTGTTATTCCTCGCTTTCTTTTTGTT
3814752
3814753
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATACACTTCAAGAGAATAATGTCCAGTTCGTGTCGG
3814825
3814826
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATGGTGATGAAGTGAGGTATGAAGCTGGAAGCGGAGA
3814899
3814900
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
TTTTATAGTAGATTAAGTTTTCTGCGTTAAAATAAT
3814972
3814973
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATTGTCTTGAACTCAGGGTCTATATACCGCACCAAGCA
3815047
3815048
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
CTTCGGATAATCCGTCTTCTCGTTTAATTCTTAAGCCA
3815122
3815123
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ACATATACGAAGGTTTAAACAGGACAGCAGAGCAAAG
3815196
3815197
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
GACTACATTCTTTTAATTTTTAAAAAAGAAATATTAAA
3815271
3815272
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
AATCTTCTGCGAGCAGAAGGAGTTCGTTTCTGTTGCAAC
3815347
3815348
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
CCCAAAGAAAGCGCATGATAGGGTCTTTAGGTGGCTTCG
3815423
3815424
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATATTACAGTAACAACTAAAGCAGGACATAAAAGT
3815495
3815496
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
TACATGATATTACCTCCTATTTTTATTTTTCTTCCAG
3815569
3815570
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
AGCATCCCTACTTAAAGAGACTGGGGGCATATAACCCC
3815644
3815645
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
TTCAATCGTGGCCTCCAGGGAACGGGCGTAAAACAGTTCTT
3815722
3815723
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
ATAGAAGGGGCTTAAGCCCTTTTTATTCTGACCTGAA
3815796
3815797
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
AGGAAGCAGAGGATTACGTACGTCAGAAAACAGACTT
3815870
3815871
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
TTTTGTCAAGCCATTGATACATCCTTTAATGTCTA
3815942
3815943
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
GTATAGCACAGGCCCAAGTAAAAGAAAGGAGTTCATCA
3816017
3816018
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
CTACAGCTATAGCTTGCTTGAATACAAACTCAACGA
3816090
3816091
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
GTCCCTCCTTATGCTTCAACATTGATTGCTACGCCT
3816163
3816164
GTTGAAGAGGTACTTCCAGTAAAACAAGGATTGAAAC
AACCTTACTATGATGTTATAACATACAAAGGTTGTAAA
3816238
3816239
GTTGAAGAGGTATTTCCAGTAAAACAAGGATTGAAAC
CTCAAACTCAGTGATACTAAGTATTTTAAAAGAAAA
3816311
3816312
GTTGAAGAGGTACTTCCAGTAAAACAAGGATAAAAAC
3816348
Left flanking sequence : Till position 3813209 (length
bp)
ATGGTGGATTTTAGGAGAATTTTGATAAAATATGACCAAAAGAGTTCAGTCAAAAAAATCTTGTAAGCAT
TGACATTTAAGCAATATCACCTCGAGGACT
Right flanking sequence : From position 3816348 (length
bp)
ATATGAGACTCTATTTCAAGCCTTACAGAATCAGAACTTCCACCAATCCATTTTCTGTGCCGTTAAAACA
AACCTTGTAAGGAGGTGCCGAATGAAGCTG
Print the CRISPR sequence : From position
bp To position
bp