Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009051_1                                                                                                                 top


Strain : Methanoculleus marisnigri JR1 RefSeq :NC_009051 (chromosome circular)
CRISPR id : NC_009051_1
DR consensus (28 bp) : TCGAAGACCTTCGGTCTTCTCGAACTCCNumber of repetitions :7
Begin Position : 153124 End Position : 153636

153124CTGGGGACCGTTGGTCTTCTCGAGTTCCGTTCGCACCTCTGGCACTCATGCTTCACCTCCTTCGCCCGTCGCAC 153197
153198TCGAAACCCTTCGGGTTTCTCAAGCTCCCGTCCGAAACCCGTTGGGTTTCTCAAGCTCCGGAATCGAAGCCTGACGGCTTCTCATGTTCCGTTCC 153292
153293TCGAAGACCTTCGGTCTTCTCGAACTCCCGTCCTACGGACAGTCGTTCGTTGGAACGTCGCACCCTGCGGGCCATCGCAT 153372
153373TCGAAGACCTTCGGTCTTCTCGAGCTCCGGCTCTACGAGCCGTCGCATCCTACGGACCGTCGTTCGTTGGAACGTCGCAT 153452
153453TCGAAGACCTTCGGTCTTCTCGAACTCCTGGCGTTCCGGCAGTCGCAACCCGCACCTCCGGTGCTCCTGCTCCGTTCC 153530
153531TCGAAGACCTTCGGTCTTCTCGAACTCCTGGCGTTCCGGCAGTCGCAACCCGCACCTCCGGTGCTCCTGCTCCGTTCC 153608
153609TCGAAGACCTTCGGTCTTCTCGAACTCC153636
Left flanking sequence : Till position 153124 (length bp)
GACCCGGCAAGGAGGCCAAAGACCACTTTGGCGAGTGCGACGGCGAGGTTCAGGGCGAGGACGATGATAA
AGATCCGCCGCACCTTTCGGCCGGTTACGC
Right flanking sequence : From position 153636 (length bp)
TGTCCTACGGACAGTCGTTCGTTGGAACATCGCAACCATCATCCACCGGGGGTAGGTTCTCTGGCGGCAT
AGGGTTTCCGAAGATAAAGGTGAAAGATTT
Print the CRISPR sequence : From position bp To position bp