Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_009053_1                                                                                                                 top


Strain : Actinobacillus pleuropneumoniae L20 RefSeq :NC_009053 (chromosome circular)
CRISPR id : NC_009053_1
DR consensus (28 bp) : TTTCTAAGCTGCCTATACGGCAGTGAAGNumber of repetitions :26
Begin Position : 235633 End Position : 237163

235633ATTTGTGGCTGCCTATACGGCAGTGAAGGCAGTCAGTCATCAGCTTGGACTTTTACTAGA 235692
235693TTTCTAAGCTGCCTATACGGCAGTGAAGTTTTCCCCCACCAACCGAGTGTTTTCAACATT 235752
235753TTTCTAAGCTGCCTATACGGCAGTGAAGGGTATCAATAGAGTATTGAATCTTGTTCGGGC 235812
235813TTTCTAAGCTGCCTATACGGCAGTGAAGCTTTACACAAGGTATCTTCCGCTCCTTTAAAT 235872
235873TTTCTAAGCTGCCTATACGGCAGTGAAGAGCGTAATCAGGTTGAGTCTTTACAACAATTT 235932
235933TTTCTAAGCTGCCTATACGGCAGTGAAGGGAGCAGTTAGAAATTTATCGTCGGGGCGAAT 235992
235993TTTCTAAGCTGCCTATACGGCAGTGAAGATTTGATAAAATCGCTTTTAATACGTGCTTGTT 236053
236054TTTCTAAGCTGCCTATACGGCAGTGAAGTTATTTCTTTAAGAATCATTTTATCAGCATAA 236113
236114TTTCTAAGTTGCCTATACGGCAGTGAAGAAGCGGTTCGCTTACGTCATGGGATTTTACAC 236173
236174TTTCTAAGCTGCCTATACGGCAGTGAAGAAGAGTAGAATACGCCGCACTTGCGGCATAGA 236233
236234TTTCTAAGCTGCCTATACGGCAGTGAAGGAAAAAATAATGTCATACCCTCGAAACCCAAA 236293
236294TTTCTAAGCTGCCTATACGGCAGTGAAGAAAAATTCCACATTCCGTGTGAGCTTTCTGCT 236353
236354TTTCTAAGCTGCCTATACGGCAGTGAAGATCGGAAGATTCAACATCAGACTATTTTAAATAT 236415
236416TTCTAAGCCTGCCTATACGGCAGTGAAGCTTGATTTCTGCAATGTGGATTGCACCCGCTA 236475
236476TTTCTAAGCTGCCTATACGGCAGTGAAGGAAACCGGTGAAGTTAAAGATAAGCACAATTT 236535
236536TTTCTAAGCTGCCTATACGGCAGTGAAGCTGTAACTGTTGCTTGTTGGTAGGTTTTTTCA 236595
236596TTTCTAAGCTGCCTATACGGCAGTGAAGATTTAATCGTTAAAGCACGCCAAGAACTACTT 236655
236656TTTCTAAGCTGCCTATACGGCAGTGAAGATTTTGGCTTAGTTGTAGCTGGCTCACTTGGA 236715
236716TTTCTAAGCTGCCTATACGGCAGTGAAGTACCTTTGGCTTTTCCGCTTGCTTTTTCAGGA 236775
236776TTTCTAAGCTGCCTATACGGCAGTGAAGACGAAAAACGAGCATTGATTACAGTTGTAACT 236835
236836TTTCTAAGCTGCCTATACGGCAGTGAAGACTAAACAGCTTTTAAATTCAATTCGCTACAA 236895
236896TTTCTAAGCTGCCTATACGGCAGTGAAGCCATTGACTGGTAACTTTTATCAATTTCATCA 236955
236956TTTCTAAGCTGCCTATACGGCAGTGAAGTTTTGATAAATTTCTCGCCAATCACAAAATGA 237015
237016TTTCTAAGCTGCCTATACGGCAGTGAAGTTCAGGTTTTTATTGGTGAGGCTCGTTATCGC 237075
237076TTTCTAAGCTGCCTATACGGCAGTGAAGCGTTCTCAGCGCACTCAAATCACGCAAGACGA 237135
237136TTTCTAAGCTGCCTATACGGCAGTGAAG237163
Left flanking sequence : Till position 235633 (length bp)
TCGCCCGCTTAGAATGTAAAATCGTCTTTAAATCCGAAGACGGAATATAAGGTGTTTTTTTCATATTATT
TTCTCCGATGTTATTTATGGAATACAGTTG
Right flanking sequence : From position 237163 (length bp)
TCGTTATTTTACTTTAGAATGTCAGATATACCAAGTTGTTAAAGAGCTTTTAATCAAAAGATCCCTTTTT
TGAGCGGTTTTTATAACCCTTTGTTTCTAA

Print the CRISPR sequence : From position bp To position bp