Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009706_2                                                                                                                 top


Strain : Clostridium kluyveri DSM 555 RefSeq :NC_009706 (chromosome circular)
CRISPR id : NC_009706_2
DR consensus (30 bp) : ATTTAAATACAATCCTTGTTAAGGTTCAACNumber of repetitions :12
Begin Position : 2367160 End Position : 2367909

2367160TTTTTTTGTCAAATCTTGTTAAGGTTCAACAAGCAGTAAAGATAAATCTTTAAGGATTAAAAATGG 2367225
2367226ATTTAAATACAATCCTTGTTAAGGTTCAACCAACCACCTTCTTAACCTTATAAAATTGTGTTC 2367288
2367289ATTTAAATACAATCCTTGTTAAGGTTCAACTTATACTGCCTGAAAAGCCAAATATCCATAAGCATT 2367354
2367355ATTTAAATACAATCCTTGTTAAGATTCAACAATTACCAATATTTTTACCTAAAGTTTTTAATCTT 2367419
2367420ATTTAAATACAATCCTTGTTAAGGTTCAACTTTTTAGTAAGAGGACTTAACCATTTTGGCAGCTCT 2367485
2367486ATTTAAATACAATCCTTGTTAAGGTTCAACACACTATATTTTTGAATATCACCTTGTAGTATTTTAG 2367552
2367553ATTTAAATACAATCCTTGTTAAGGTTCAACTTGTATCCCCATCAATTCCTCTATTCTTTATAGAT 2367617
2367618ATTTAAATACAATCCTTGTTAAGGTTCAACCAGCAAAGATTATGGAATTATAAGGAGGAAATTTAA 2367683
2367684ATTTAAATACAATCCTTGTTAAGGTTCAACTTTCCTATATTAATCAACATTTTATTTTCTCATGTT 2367749
2367750ATTTAAATACAATCCTTGTTAAGGTTCAACCTTGTGGTATTAAAACAATCCTGTCTGGTACTCC 2367813
2367814ATTTAAATACAATCCTTGTTAAGGTTCAACCTAGGATATGCATTTTTATTCTTTTTAATAATTCTT 2367879
2367880ATTTAAATACAATCCTTGTTAAGGTTCAAC2367909
Left flanking sequence : Till position 2367160 (length bp)
GTTCCCATGCTATTTCACAAAAAAGTTCTGGAAAAAGCAGTTCTACTATTTCTACTTCAAAGGTTTCCAA
TATTGTCTTCCATGCTGTATCAAAATCATA
Right flanking sequence : From position 2367909 (length bp)
CAATGTAAATTAGCCATTCTTTATTTTTATTATAACCCTAAATACATTGGCAATAAAGAGTTTGTTCGAA
ATTTTTCCAACCGTTTTTTATTTTTCAAAA
Print the CRISPR sequence : From position bp To position bp