Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009801_2                                                                                                                 top


Strain : Escherichia coli E24377A RefSeq :NC_009801 (chromosome circular)
CRISPR id : NC_009801_2
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :13
Begin Position : 3056470 End Position : 3057231

3056470CGGTTTATCCCCGCTGGCGCGGGGAACACAAAACCAAACTTCTCCATAAATTCCATAGCCG 3056530
3056531CGGTTTATCCCCGCTGGCGCGGGGAACACACGCGCGTACCGGATCGCGGACAACAAATTGC 3056591
3056592CGGTTTATCCCCGCTGGCGCGGGGAACACCTGAAACCAGTTGGCTCGTTGTTCTTCTTTGG 3056652
3056653CGGTTTATCCCCGCTGGCGCGGGGAACACGCTCTTCAACGGTTAGCTCAGGAGCTTCTTCTC 3056714
3056715CGGTTTATCCCCGCTGGCGCGGGGAACACTTTTTTTGTCGCATCCAGCCGTATTTTTTCGC 3056775
3056776CGGTTTATCCCCGCTGGCGCGGGGAACACTCGCCCATGTAACAGAAACGGGGATTTTAATT 3056836
3056837CGGTTTATCCCCGCTGGCGCGGGGAACACTCGGCCAGCGTCCAGGCTGGCACCCGATATTC 3056897
3056898CGGTTTATCCCCGCTGGCGCGGGGAACACGGGGCTTTTTTATATCCGCGCCACGCTCGGCG 3056958
3056959CGGTTTATCCCCGCTGGCGCGGGGAACACTTGTCACGAACACATAGCAACTAGGTAACCAC 3057019
3057020CGGTTTATCCCCGCTGGCGCGGGGAACACAGTATTAACTGCGGTGGCAGTGAGGCCAATAG 3057080
3057081CGGTTTATCCCCGCTGGCGCGGGGAACACATACCGCAGCAAATTACGGTTCCAGAAACGCG 3057141
3057142CGGTTTATCCCCGCTGGCGCGGGGAACACTTCACGCCAACGCAGAGGCGGGCCGCGTTAAT 3057202
3057203CGGTTTATCCCCGCTGGCGCGGGGAACAC3057231
Left flanking sequence : Till position 3056470 (length bp)
GCTGGCGAAGGCGTCTTGATGGGTTTGAAAATGGGAGCTGGGAGTTCTACCGCAGGGGCGGGGAATTCTA
AGTGATATCCATCATCGCATCCAGTGCGCC
Right flanking sequence : From position 3057231 (length bp)
ACTAAGCATACATATCTGTTTTTAAACAAATTTATTCCACATCAACAATCTACCAACTAAATTCAAACAT
TTCCTTATTTTTAAAGAACGTCTAACTTAT
Print the CRISPR sequence : From position bp To position bp