CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_009828_1
Flanking alignement tool
Page manual
  
Home Page
NC_009828_1                                                                                                                 
top
Strain :
Thermotoga lettingae TMO
RefSeq :
NC_009828 (chromosome circular)
CRISPR id :
NC_009828_1
DR consensus (30 bp) :
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
Number of repetitions :
44
Begin Position :
205528
End Position :
208415
205528
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CTTGACTATCTCATCTGCGTTCGGTATACCTGGAGTTA
205595
205596
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TCGCCTTGCATACACTGGGACGGATTGGAAAACTTT
205661
205662
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CAGTTCAGAAGCTTCAAGAGCAATATCAAACTGCTGT
205728
205729
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
AAGATTTGAAAAAGTTGAGGGATGGTATTGTGTTCAT
205795
205796
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
GTTTCCGTATTTGTTTGTGTCTGTGTCTGGACTTGTT
205862
205863
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TAGTGGTATCAAAATTTGTTTATATCACCCAGACAG
205928
205929
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
GGCGGATAACTCAATAAATTTTGAGGAGGTTTTCATA
205995
205996
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TGTGGTGGTATAGTGTGGTTAGACGGGAAGGTATACA
206062
206063
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CACGCAAGAAGCCTTTGTGTCCTTCGTTGCTGCGAT
206128
206129
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TCATAAGATGTTGGTGTGCTTATCTCATTGAGTATTGT
206196
206197
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CTGATATGAGCATTGCTATTCCCAACACAACCACAA
206262
206263
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
AACTGCAAAATCTGGGAGAATTAAATTGTTTTCTCC
206328
206329
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TTGTGCTTCTTAAGAATCTCCCTGGCCTGCTCTGGGG
206395
206396
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TGAAAGAACAAAGAGAATATTTAGCTGAAAAATATCC
206462
206463
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CAGTATAACCAAGTGCTGAATCATACCCACCAGCAT
206528
206529
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
ATAATCTGCGAGAACTTCCTAAGCTTTTTCCTAAGTT
206595
206596
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
AGGTTAAGCACAAATTTGGTTCCAAACGAGGTGCAA
206661
206662
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
ATTGCCTGCTCAAAGGCTTCGTGCGGGCTCATCTCT
206727
206728
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
AGAAGAAAACCATACGATGACAAAAAGATCGATGCAC
206794
206795
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
GATGCTGACAAACATCTATACATAACAGTAGCCGAG
206860
206861
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CGCTTCTTCTTCAAAACATGTCTCAACAATTTGCT
206925
206926
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TTAACAATATCATCCGAGCTAAATATTCCGAATACT
206991
206992
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
GGCGACTTACTTCGTTCTGCTTGGAGACATTCTCGA
207057
207058
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TCCGTAAGCTGTCGCGAATTCGTTGTAGTATGCTT
207122
207123
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
GGGAATCGTAGTGCTTGTGTTGCACCATTATATGTGTG
207190
207191
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CAACTTGATTCAATTGAGATGATCGCGAACACGTCC
207256
207257
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TGTTACATTTGCATATGGTAGTTATTGGGACTTTGGT
207323
207324
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CGCCTGCTGAAGTGTCTCATATTTTTGCTGTAGCTCT
207390
207391
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TGTCGTTGAGGCCTCGAATTTGAACAGAACACCGTT
207456
207457
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TTCCACTATATCCTTCAATTCATTCAAATCATCGATG
207523
207524
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
AAGCGTTTGAATTTTTGAATCCAGATCTTGGAGACT
207589
207590
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
GGATTTTCGCTATTGGATAGTTTGACTCCAGAACAG
207655
207656
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TTGGATATTTGAATGAAGTATCGCTAATATTTGGAA
207721
207722
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TAGACGCGTCCCAAGCAATGGACTTTCTCCAACTTG
207787
207788
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
GACTTCGATTGTGAAATTCACACCATTAATGGGTT
207852
207853
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CAAAAGAGGGAAAAACTGGATGGCAGTAATTACAGC
207918
207919
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TTCAATCACCAGGCGGAATTAACTTCCGAGGAAGCT
207984
207985
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CCGGCATTGGCCTTTTGGCAAGTGTATACGAAAGGAT
208051
208052
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
CGTTCTACTCAGGCTATCGCGATCTTGCACAATCTT
208117
208118
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
GCCGTTGGAGCAACGATACCGATACTTTGAGCAAGCTCT
208186
208187
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TCAGAAATTTCATCAGCAAGAGCATCAATAGACGTT
208252
208253
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TCGCTTGATATTGCTCTTGATATTGATCTTGTGTTTG
208319
208320
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
TTCCAAATGCGATCGTGAGTGCTCCAATTGTTGCTG
208385
208386
GTTTCCATCCCTCTAAGGTTCGATTGAAAC
208415
Left flanking sequence : Till position 205528 (length
bp)
AAGCTTTTTTACTAAATGTGTAGAAATAATAAACATCGAAGAGGAATATTCAGGGAAAATGGGGAGTTTC
GATGGGCAAAAATGGTTGAAGTGTGGCTAA
Right flanking sequence : From position 208415 (length
bp)
CCATAAGATACTGAACAAATAATAATCCCCAGAAACAGATTTGTCAATAAATATTATACTATATGGCATG
CAAGAATATATAAAGGCGAGCATTAAAAGC
Print the CRISPR sequence : From position
bp To position
bp