Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_009953_7                                                                                                                 top


Strain : Salinispora arenicola CNS-205 RefSeq :NC_009953 (chromosome circular)
CRISPR id : NC_009953_7
DR consensus (29 bp) : CTGCTCCCCGCGCATGCGGGGGTGATCCCNumber of repetitions :24
Begin Position : 2939492 End Position : 2940920

2939492CTGCTCCCCGCGCATGCGGGGGTGATCCCCCGGCCACCAGGCCGTTCTGCTCGGCGGGTGT 2939552
2939553CTGCTCCCCGCGCATGCGGGGGTGATCCTCCCCATCCGACCCCGGACGAGAGCCCCGAGCA 2939613
2939614CTGCTCCCCGCGCATGCGGGGGTGATCCCGTAGCCAGCGGCAACGACCGGATCGCGGTTCA 2939674
2939675CTGCTCCCCGCGCATGCGGGGGTGATCCCTACCTGCGCGACCTTCACGACAAAGGAACCCC 2939735
2939736CTGCTCCCCGCGCATGCGGGGTGATCCGATCGTGATGGTCGCCGGGGTGCTCGGCGACTA 2939795
2939796CTGCTCCCCGCGCATGCGGGGGTGATCCCGGCGCGACCACGGCCCAGAACGTCTTCCACTG 2939856
2939857CTGCTCCCCGCGCATGCGGGGGTGATCCTGGTGGGTCAAAGAGCAGGCACGCCGGGGTCGC 2939917
2939918CTGCTCCCCGCGCATGCGGGGGTGATCCCGCGGCCTGCCCGCCCGGTTCCTGTTTGCCTTGC 2939979
2939980GAGCTCCCCGCGCATGCGGGGGTGATCCCCGGTACGGCCGCGCGCCGAGCGTTGGGCACGT 2940040
2940041CTGCTCCCCGCGCATGCGGGGATGATCCGTACGGGTCCTTGCGCATTTCGTTTGCTTTCGG 2940101
2940102CTGCTCCCCGCGCATGCGGGGGTGATCCCACCGCCGGCACCCTCGGCACGCTGATCGACAC 2940162
2940163CTGCTCCCCGCGCATGCGGGGGTGATCCCTCGACGGACCCAGCCGCAGCCAAGAACTGTGC 2940223
2940224CTGCTCCCCGCGCATGCGGGGGTGATCCCAGGCGCGATGGGCGCAGGCCGTCCGAGGGCGG 2940284
2940285CTGCTCCCCGCGCATGCGGGGGTGATCCGAGGGCGTCACCTGGCAGACCATGCCGGCCCGG 2940345
2940346CTGCTCCCCGCGCATGCGGGGTGATCCCTGACCGAACACGTCCAGCCCGATCACGGTCTG 2940405
2940406CTGCTCCCCGCGCATGCGGGGGTGATCCCGCGTCCAACTGTGTGGAGGTCGCCACCAGTCC 2940466
2940467CTGCTCCCCGCGCATGCGGGGATGATCCCGTGCAGGAGGTCATCGGCAGTGACCAGTAGGA 2940527
2940528CTGCTCCCCGCGCATGCGGGGGTGATCCCTCGGCCAGGGAGTTGCCCTCCCACGCCTTCAG 2940588
2940589CTGCTCCCCGCGCATGCGGGGGTGATCCCAGGCGCCGCTCCCCCACGTTCAGGTTCGGATC 2940649
2940650CTGCTCCCCCCGCATGCGGGGGTGATCCCGCCCCGCGGCGAACGACGCCAACCCCGCCGCA 2940710
2940711CTGCTCCCCGCGCATGCGGGGGTGATCCGGCCCGGGCGGGGACGGGATGGTGGAGCACTG 2940770
2940771CTGCTCCCCGCGCATGCGGGGTGATCCCGCAGCTCGGCCAGCGCCTCGTCCTGGTTGAAC 2940830
2940831CTGCTCTCCGCGCATGTGGGGGTGATCCCCGGCTCGGGCGTTCGGTGGACGGCGGACGTGG 2940891
2940892CTGCTCCCCGCGCATGCGGGGGTGATCCC2940920
Left flanking sequence : Till position 2939492 (length bp)
CCCCGCAGCCACCAAGACCAACGACTAAAGATCAACCAAACCGAGGTGGTCCAGTTTCAGCCGGACCACG
GTGGTCCCGTTTGAGGCGGCGTTGACACAA
Right flanking sequence : From position 2940920 (length bp)
ATCATGCTCGGCCAGCGGGCACCTGCTCGACGACTATGGCGCGTTCATGCCGCTGCGCTCCTGTCCCACC
ACGCGGACCTCGACGCTCGTACGCGCCGCC
Print the CRISPR sequence : From position bp To position bp