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CRISPRs details
NC_010175_25
Flanking alignement tool
Page manual
  
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NC_010175_25                                                                                                                 
top
Strain :
Chloroflexus aurantiacus J-10-fl
RefSeq :
NC_010175 (chromosome circular)
CRISPR id :
NC_010175_25
DR consensus (37 bp) :
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
Number of repetitions :
84
Begin Position :
4533814
End Position :
4540010
4533814
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
AGGTTCAAAGATTAGTTCTCGGCGGATCGGTAATCCGT
4533888
4533889
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TCTCACTTTCTAGCGTAGCTAAAACTTGCCTGTACGAA
4533963
4533964
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GTAAACGCCGAAGTCGCCCACGTTCTCGGGCATACGA
4534037
4534038
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GCGTGTGTGTGGTGTTACTCAGCCGGCTGGCCGTTG
4534110
4534111
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GTAACACCACACACACGCCCGGATCGTGACGCGCCATC
4534185
4534186
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TTGAGCGCGGGCTCGCGTCTACCGCGTCAGCCGCCTC
4534259
4534260
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CACGCAGCGTGACGGTGGCGATCTGGTGGCGCTGC
4534331
4534332
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TAACCATGGCGACCAGCAGCACGATGGCGTACATGGCG
4534406
4534407
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CTGAGACTACTTGTCGCTGGCGGCGGCCTCGAACTGG
4534480
4534481
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TAACCATGGCGACCAGCAGCACGATGGCGTACATGGCG
4534555
4534556
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CTTACCAGCCAGCATGTAGAACAGCTTGGCCGGCACCT
4534630
4534631
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TTGATGGCGTACTTGACGAGCTTCTTGGTGTTCCAG
4534703
4534704
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
AAGCAGTCCAGGTCGATGGTCTTGGGCGCGGCGTTGG
4534777
4534778
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GCGTGTCGCCGCCGCAGACCAGGTTGACGATCACCG
4534850
4534851
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TCGCTGGACGTCACCGTGAAGCAGGATCATCGGCTT
4534923
4534924
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CGTTGAAGGTCTTGATCTCCTCGCCGTTGGCGAACAC
4534997
4534998
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GTGCCATCGAACTCTTCCTCCGACTCCGACGCTTGTCGA
4535073
4535074
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CCCCCATCGCGCGCAGGTCATCAGTGACGCTGTTGAG
4535147
4535148
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CCACGCAACCTCGCCATTCACCATCCACCCCGTATAG
4535221
4535222
CAGCAGAGCATTGCCCCGTAATGAAGGGGTTTGAAAC
GGAACCTAGGCGGCCTCGACAATCGCGTTGCGGCGG
4535294
4535295
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ATCGATGCCGAAAGGCCTGCCGTTGGGCAGGCCTTTTC
4535369
4535370
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GCCAGAACCAGCATCACACCCAGCGGCATGAGCAGG
4535442
4535443
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GCGACCTCGGCGTAGACCGGGGCGGCGGAGAGCGAC
4535515
4535516
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACGAGGGCCGTGCCGATCTGCTGGAGCCGGAGGTCGA
4535589
4535590
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACAGCCCCACGAACGCGCCAATGAACTGCGGGCAACT
4535663
4535664
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GTCCTTGGGGCATAAGCCTCCGTGGACGCGGGTGAACC
4535738
4535739
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TTTTCTTGATCACGTCCCAGACGTCGCCGGGCATGGT
4535812
4535813
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACGTTCTCCTTGTCTCTAGCCTTGAAGGCTTTCAAACGG
4535888
4535889
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACTTACGGATACCTATGGATAACAAACGAACGGCGAG
4535962
4535963
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CTCAAAGTGGCTGATGATGTGCGCGCGGTGATGGGC
4536035
4536036
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TGGCGGCGATCTTGTCGCAAGAGTACCGCACTAGCGTACC
4536112
4536113
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GCAGGTGCAGTTTGCGCTTGATGTTACGATCAGTG
4536184
4536185
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CCAGGTAGCGGCAATTCCGGCGTACGACGGTGCAGCCGG
4536260
4536261
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACGACCGACGACGGACGCGGAACTAGGCGGCCTCGA
4536333
4536334
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CTGCGGCTGCGGCGCTGCCCACAGACGTCGTCCCCCG
4536407
4536408
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CTTGTCGAGCTCAATGAAGAGGCGGGGCAGGGAAGA
4536480
4536481
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ATCGAGGTTGAGCACCGTGGGCAGCTCGCGCTCGAGG
4536554
4536555
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CCTATAGGAGGCTTGCCGACGTCCAGTACACCGGGGCCG
4536630
4536631
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
AGCGGTCTTTGCTCCTTATCGATGATAACACACGAG
4536703
4536704
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TCGGCGGCGAAACAGATAGTCCGCAGCCAGATAAAT
4536776
4536777
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CGAAGATGCGGAACTGCGCGGCGAGAAGCACCACGGT
4536850
4536851
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TCGGTGGCGGTGAAGTTGTTCAGCACCCAGTTGGCTGC
4536925
4536926
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CGAGAGAATGCCGTAGTTCTCGGCGTCTCTCGAGAAG
4536999
4537000
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CTCTCGTATCGCAGTGAATCCCAAAGGGAGAGACGA
4537072
4537073
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GTTTGGTTCCATCAGAACTACGAACCGGACTTCCGG
4537145
4537146
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CCCGACGTTGTAGTGCATGGGAAGGAAGTGGTGACGGAA
4537221
4537222
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
AAAAGACGATGGACGGAGGACGCGGACGTGGCTAGC
4537294
4537295
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TCCTGTCACTGAGGGGGTTTAAACAAACCCCCGCGGAT
4537369
4537370
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CTGACGATGCTCATAACCGAGACCTCCACGGGAGACT
4537443
4537444
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GACGCCACGGGCGACGACTTGTTGTCACACGCCGCTT
4537517
4537518
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GCGTTGCCGAGCACGTCGGCCATCACGCCCTTCATAAA
4537592
4537593
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CACGCAGCGTGACGGTGGCGATCTGGTGGCGCTGC
4537664
4537665
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ATGATTCATGCGCGCACCGTGTCTCGCCGTTGCGAGGG
4537739
4537740
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACCGTCTTGCGAACTCGCCGCATCCTTGGAAGGATGC
4537813
4537814
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TCGAAAGGCATCATCTCGCCAAACCCCGCGACCCCC
4537886
4537887
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TTTATTGTCCAATCGCGTGCGCGTGCGTGTGCTAGA
4537959
4537960
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CCTCAACGGTGGGGCGATCCAGGATGCCGAAGTCGCCG
4538034
4538035
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TAAGGAGTGCCTATGCCCCAAAACTAGCGTTTGGCAA
4538108
4538109
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CCGTTACGTGCGTGCGATGGCCTCGCCACGCTACTTA
4538182
4538183
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GCCCGTGACCTCGTACTTCTCTACCATCGCCGGGATCTC
4538258
4538259
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CCACGACGCTACCGGGGTAGCCGTCGCGGTCGCCGTTG
4538333
4538334
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GGGTCCGCCTTTCTTTTTTCTTATTCTTTTCTGCCTC
4538407
4538408
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TCCGCCTCATCGTAGAAGCCGAACGTCCTGATGTCGT
4538481
4538482
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TTCTCGCCGTCCGCGTAGACGTACACCGTGCCGGCGTGC
4538557
4538558
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
AAGCACTCGGGGCACGTGTCGGAGTTCGACACGTCG
4538630
4538631
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACGACGGACGTGGCTAGAAGGTCTTGGCGAGCGAGGC
4538704
4538705
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ATCCCGGAGGATGTGGGTGAACCTACTGCCGGACACAAC
4538780
4538781
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
AATGATCAGGACAACCCCGAGAAGCTGGGCGGCGCCAT
4538855
4538856
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CTGCGGAGCATCGTTTACGGCGTGGACTACCCGGGTAT
4538930
4538931
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACGACGGACGTGGCTAGAAGGTCTTGGCGAGCGAGGC
4539004
4539005
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ATCCCGGAGGATGTGGGTGAACCTACTGCCGGACACAAC
4539080
4539081
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACGACAAAGAGCAAGAGCGTGATCAGCGTCGCGATC
4539153
4539154
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ACGACCGGGGCCGCGGTGGGCTCGGCCGCGGCGGAC
4539226
4539227
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
TTGCCGTCGCTGTCGTTGTCGTAGAACCAGAGGCCGA
4539300
4539301
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
ATGCCGAGGAGCAGAGCCCCCGCCACCACGACCGAGAT
4539375
4539376
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
AGCAGCTACTTCTGGTCGCAGCCGCCCATCGTCTCGTT
4539450
4539451
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GCGAAGTCCTGGCCCCTGCGGTCGTACTCGCTGACGAG
4539525
4539526
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
CTCATCATCTGCACCTTGCCCTGGTCGAGCGTGGCGGCCG
4539602
4539603
CAGCAGAGCATTGCCCCGCAATGAAGGGGTTTGAAAC
GTCTGTAGGGGCGACGCATGCGTCGCCCCTACATGCCC
4539677
4539678
CAGTAGCGCAGTACCTCGTAATAAAGGGGTTTGAAAC
TGATCCAAGATATAATGATGGTCGAAGTTACGATCATC
4539752
4539753
AGCAGCACGAGTGCCCCGCCATGAAGGGGTTTAAAAC
CCGATCAGCCTACACAACATCCGTCGTATACCCTTCC
4539826
4539827
CGGCAGCGCAGTGCCCCGCCACGAAGGGGTTTGAAAC
CCAATTCTCTGTCGTGGTCGCGGTGTGCCCCCTAGA
4539899
4539900
GGCCGCAGCAGTGCCCCGCCAAGAAGGGGTTTGAAAC
CCGTCCGTGTGTCTGCATTGAAAATGTTGACCCAATT
4539973
4539974
CACCAGCGCATTGCCCCGCAATGAAGGGGTTTGAAAC
4540010
Left flanking sequence : Till position 4533814 (length
bp)
TGCCGGCCATTGCCATTGTGTACAATGAAGGTGGGCATCGGTTATCTGGGAAAAAGCGCATACATCTGCT
TGAAACCCTGCCCCCCTGGTGTGAGACGGA
Right flanking sequence : From position 4540010 (length
bp)
GTCACACAATGCCCGGTAGGGCGCATGTTCTGTGCCTCTGCCGATGTTACCCGATGTGGTTCTTCTTCTG
CTTCCACTTGCGCTATGCAACCCCACACTT
Print the CRISPR sequence : From position
bp To position
bp