CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_010320_2
Flanking alignement tool
Page manual
  
Home Page
NC_010320_2                                                                                                                 
top
Strain :
Thermoanaerobacter sp. X514
RefSeq :
NC_010320 (chromosome circular)
CRISPR id :
NC_010320_2
DR consensus (30 bp) :
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
Number of repetitions :
11
Begin Position :
2340404
End Position :
2341103
2340404
CACTATTTTCAGGATAGGTAGGCTAAAAAC
TAGAGAGGGTAAAAGCGGCATGGCAAGTTTTTGAAA
2340469
2340470
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TTAAAGGAGGAAGATAAAAATGATAACTTCTGTAAA
2340535
2340536
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
AAGGTATCAAAAATTATGCTTATTTTGCGCAATAGAGAA
2340604
2340605
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CAAGCCAAACAATATACGTTAAGTTTTATTTTGCTGA
2340671
2340672
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
ATCGGGCCGGTCAGGGAAGTGGAACGGTTGTAATTT
2340737
2340738
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TGGGGACACAATTTACGATTAGGGACACAAAAACACC
2340804
2340805
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
CTGTATAAGTTGCAACTCCACTATTATCAAGCAATCTAA
2340873
2340874
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TTGGTTTCGGGCTGAACAGGTAAAGGCGTTTTTGCAA
2340940
2340941
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
GATACATTTACACCAACGGTAAAAAACCTTTAAAAGG
2341007
2341008
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
TCTTCATGTTCCTATCACCCCAAGCCTGTTATTCTC
2341073
2341074
GTTTCAATTCCTTATAGGTAGGCTAAAAAC
2341103
Left flanking sequence : Till position 2340404 (length
bp)
TCTGCAGTGTCTTAACTTTTAATTTAACTTTATTAACCATTTATTTATCCCATATTTTTACATCGGTATG
GGTTTAGTTTTTTGTTGCCTTTTTGAGAGA
Right flanking sequence : From position 2341103 (length
bp)
GAAAACTAACCCGCAGCCGATGCGGGGAGATAAAAAAAGTTTCAATTCCTTATAGACTCCCATGCCGCAA
ATGCAGCACCAGCAGAGGATGAAAATGTCC
Print the CRISPR sequence : From position
bp To position
bp