Institut de Génétique et Microbiologie

CRISPR details


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Université Paris Sud

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NC_010480_1                                                                                                                 top


Strain : Synechococcus sp. PCC 7002 RefSeq :NC_010480 (plasmid pAQ6 )
CRISPR id : NC_010480_1
DR consensus (36 bp) : GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACNumber of repetitions :89
Begin Position : 54528 End Position : 61299

54528TTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAAGCAGAGACAGGGATTGAGAGAACACCAGCAAACTCCTTATTG 54607
54608GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTAGAGGGCTTCTCTTGAGCTTTGTTGGCGAGTAACA 54680
54681GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACATAAGGATCTATTAAAAGCAAATCAACATCTATTTTAA 54754
54755GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTGGTTTACTGCTGAGTTCTTGGTGACTTACACCAA 54825
54826GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACATGAGTGCTATGGGTTATCGATCCTATGATCAGCTATTGAACC 54904
54905GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTTATTGTTAAAGCGTTGAGCTTCCTCAACAAGTT 54975
54976GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGGTGAAGGAGAAAAACTTCCCTGAGTTTAGTAAGGAG 55048
55049GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTACTGCAGAAGTCCGCTTTGGACCCGATGACTATCAAAAGA 55125
55126GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCAGAGATTGTAGATCATATAGACTTTCTATGGAACTAT 55199
55200GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACACAAGAAATGGCTGAATATCTTGATGAATTACTTTCTGTTAA 55277
55278GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTGTAAAGATGACCCTACGGTTAAAGAATTTTCTAGAATC 55353
55354GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTTTTTCAGTCACAATCAGAAAAATTCTATAAAGAATTGAGT 55431
55432GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTGAGAGAAGAGAAAAAGTATGTTCACGCCTTTGTACAAGG 55507
55508GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGAAACAATATCAGAGTCAACTCCAATAGGACCACCAAAGA 55583
55584GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTACGGGCACGCCTGTGGCAATTCACCTTTGACGAAGTG 55658
55659GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAGATTAGCTAGAACCTCACGCAAGGGACTAAAGTGG 55730
55731GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCACAGTTGCGTAAGCTCTTGGTGAGACAACTAAAGGCCCATGCCAA 55812
55813GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTTGTTCACCATTGACGCAGTATTGCGTCTGGTAAACTTA 55888
55889GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTGGAATTGTTGGAGTCCCCCCCACTTATTAGCGGC 55959
55960GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACATCGTGTTAGTCAAGTATTTATATATGATTACAGCTACT 56034
56035GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAATAGCTAATGATAGGCAGGGTTGCGTCTGCCTTACCAAC 56110
56111GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTCCACCCTGGTTGTTAAGGTAGGGAATCTTGTTTGGAG 56185
56186GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTCCACCCTGGTTGTTAAGGTAGGGAATCTTGTTTGGAG 56260
56261GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGTCGCTGAACGGGAACCCGAACCAGAACTAGAGGAGTT 56334
56335GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGTCGCTGAACGGGAACCCGAACCAGAACTAGAGGAGTT 56408
56409GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACATTGGTCTCAATATGAGCTAACTGCCGATCAGTTAGA 56481
56482GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCGCATTAGCATTCTTACGGGCAATGAATAGTTTTTCCTCAGGGAG 56562
56563GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAATGACCTGTCTCTTCAGTACGGGTAGGTCAATTCCCGTA 56638
56639GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCGGGTAAAGGATTGGTTCGATACGACTATACAGCTCAAAAGG 56716
56717GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTGATTACAGCGCAATGACAGTGCGTGAATTGCGTGCGCTGTGCTCTT 56800
56801GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTCAAGTGAAACGCCGTAACAAGTCCGTATTGGCCAACCT 56876
56877GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTATGTTCGGTTTTATCTCTAATTTATTCACTTCTA 56948
56949GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCGGTTGATTCTTTGGTACAGTTTGACCAAGTAACTACTGC 57024
57025GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGTACATTTATGTAAATAGCAATTACCTAAATGCTGAGCTGCGT 57103
57104GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAGGTTCAGCCAAATCAATGGGCTGGAGGAAGAATACGTT 57178
57179GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCGAGCACGCGCTGGCGCTCGACGCGGCGCCGTCGATCTCGCTGTTCTGGCTCGCCACGCGCCCCGACGGCCA 57286
57287GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAATTAATGGTTTAGTTGATGTAACTCTTCGTCTTAAGGCTGA 57364
57365GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCTACCTCAACTTTTGTAGACGGCGACGGAAAACGACCTGTT 57441
57442GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGATTTTTAATCCTGTAATGTGTCGAGGGTGCTGCC 57512
57513GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTGATGTGTAATTGGGAAGACGTCGCGGCTATTGAGGC 57586
57587GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTCTACTATGAATTAAGTCATCTAATGACATGTGATGACT 57661
57662GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGTACATTTATGTAAATAGCAATTACCTAAATGCTGAGCTGCGT 57740
57741GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAGGTTCAGCCAAATCAATGGGCTGGAGGAAGAATACGTT 57815
57816GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCGAGCACGCGCTGGCGCTCGACGCGGCGCCGTCGATCTCGCTGTTCTGGCTCGCCACGCGCCCCGACGGCCA 57923
57924GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAATTAATGGTTTAGTTGATGTAACTCTTCGTCTTAAGGCTGA 58001
58002GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCTACCTCAACTTTGTAGACGGCGACGGAAAACGACCTGTT 58077
58078GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGATTTTTAATCCTGTAATGTGTCGAGGGTGCTGCC 58148
58149GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTGATGTGTAATTGGGAAGACGTCGCGGCTATTGAGGC 58222
58223GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTGACCGTAAGTGGGATCCGACGTCTTTGGATGTCAAAGTC 58298
58299GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCTCAAGAAAGCCACCCGTGTTGGTGAAGTTATCATGGGTAAA 58376
58377GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTCTCCTACTTCTTTTAAGAAGAAAGCCGCAGAAATGTGTGC 58454
58455GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTTCCCTCTACAAAGAGATGACCCGTAAGCCCATGAGCCGCAA 58533
58534GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAAAAAAGTTCTAGGGGCTTTTGGCTTTCTCAAGTATTTGGA 58610
58611GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAGATCTTTATTGAGGAGGAGGTGTTACAACCTCCAA 58682
58683GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCCCCGAAGACGGGGGTGAAGTGTTCTACAGCTGCCTTCAA 58758
58759GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGACTACGGTAGCTACGGTTACCTAGTCTTCGCTAGAGGCGAA 58836
58837GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGCCTTTCGGCTTTTAGACGGACTCATACTACCTCCA 58908
58909GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGGATTGAGGTTGACGTACAACCTATAGAAAAAGAGATAGATG 58986
58987GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAGGGGAATGGATTCTAGATCTGATACCTTGGGAATA 59058
59059GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAACCTTATAGCCGTAAGCCTATCCTCAAGAAAGGTAAG 59132
59133GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTTATTCAAGATAATTGTGTTGCAGAAGTGATTGTTAGAATCTAAA 59214
59215GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGTCCAATGGGGACTGCATTATGCAGGGGGGTCTAAAGAAACT 59292
59293GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAATACTCCGTTTTAGGATTAAATGAAGCTTATTTGGCTTCATT 59371
59372GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTCAGCAGTGAGGGGAGCGGTAGCAAATAGATTAGAGATA 59446
59447GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCATTGAGTGAAAGCGTTGTCTGTTTCCAAGAAATCTACTAC 59523
59524GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAGGCTTAAAATTATGTCTAACGTTATCACTAGAGAAGA 59597
59598GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTCATTGTCACCTTCGTTAGAAGCAGCCCACACTAGAGGATCTA 59676
59677GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTATGTCTAACATTTGTGTCGATTTTGATCGTGCTTGGG 59750
59751GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGGTTCCATTGATTGTTAGCACAGGTTTATTTGATTATT 59824
59825GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTAACCCACTTTTCCTAATCCGACTCTCCCCACCCTGTCGG 59900
59901GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACACCCTCAAGGAGTTCTCAAAGAAGGCTATTCTGATCAT 59974
59975GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTAATTCAAACTGAGGACGTGCCCTCAGATATGAGAGAA 60049
60050GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCACATTTACAGGAAAACCAAAATGACTACGAAGCAACAAAA 60126
60127GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCAACTGCGTTAAGCCCCGCACTACAGCACGCTGTTTTGAGACAGC 60207
60208GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTTTGAAACAATCAAAAGAGAGCAGCGGCCTTTATATTC 60282
60283GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACACTCTGGGAAGTTCTTCTCCTTTACCCCAGGGCGA 60353
60354GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCTTCAACTGTTGCGCAGACAATTGCTGCTGCTCCTCAGTAT 60430
60431GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACAATAAACCCACTGCAAAGGAATATAAATCGCTTAGAGG 60504
60505GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTCAAAGCGCATACCTTGAATGTTAGCAGTGCCCTTAAGAGCC 60582
60583GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACATATAAACACCCTGTACAATTACGATTTAAAATCGTCTCAA 60659
60660GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACCCGATAGAACCCGACAATCATTTCCGCGTCTTGTTCAAT 60734
60735GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTCTACCTGAACTGGAGCACTATCTCAGTGAAGTCAAGGCA 60811
60812GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACACATGTTTGATCTAACTAATGGTTTAGTTGATGTCACTCTT 60888
60889GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTGCTAATCTAAAAGGGCTATCAATTGAGATAGCCCTTTT 60963
60964GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTCGTCAAGAAGATTGGAGACTGGGTTATTCTCCAAATCGA 61039
61040GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTCGGCTAACATGTGAACTGGCAGGGCGTGAGCCCATA 61113
61114GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACGTCTGAGTTGGATAAAGCTGATTGGGATATACAGAATCA 61188
61189GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAACTTAGCACTCTTCGTATTCCCTCTGAAGTTCGCAAGGTGG 61263
61264GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC61299
Left flanking sequence : Till position 54528 (length bp)
AAAAAAACGAAAGAGATTTTTAATCATTGATTAATTTTGAATGGCTTTGCTGAAAAAAAATGGCGCGCCT
AAAGATTAGTTGGCTACGCCATATCCATTA
Right flanking sequence : From position 61299 (length bp)
CGCTGGCCTTTCAAAGGCTTGTCCGGAGAGAACTCCAGCGAGCATTTGCGACCGATAGCAAAATTTTACC
AGGCTCCAACAGAAAAGGCCAGAAAAAAAT

Print the CRISPR sequence : From position bp To position bp