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CRISPRs details
NC_010480_1
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Page manual
  
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NC_010480_1                                                                                                                 
top
Strain :
Synechococcus sp. PCC 7002
RefSeq :
NC_010480 (plasmid pAQ6 )
CRISPR id :
NC_010480_1
DR consensus (36 bp) :
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
Number of repetitions :
89
Begin Position :
54528
End Position :
61299
54528
TTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AAGCAGAGACAGGGATTGAGAGAACACCAGCAAACTCCTTATTG
54607
54608
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTAGAGGGCTTCTCTTGAGCTTTGTTGGCGAGTAACA
54680
54681
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
ATAAGGATCTATTAAAAGCAAATCAACATCTATTTTAA
54754
54755
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TGGTTTACTGCTGAGTTCTTGGTGACTTACACCAA
54825
54826
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
ATGAGTGCTATGGGTTATCGATCCTATGATCAGCTATTGAACC
54904
54905
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTTATTGTTAAAGCGTTGAGCTTCCTCAACAAGTT
54975
54976
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GGTGAAGGAGAAAAACTTCCCTGAGTTTAGTAAGGAG
55048
55049
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TACTGCAGAAGTCCGCTTTGGACCCGATGACTATCAAAAGA
55125
55126
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CAGAGATTGTAGATCATATAGACTTTCTATGGAACTAT
55199
55200
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
ACAAGAAATGGCTGAATATCTTGATGAATTACTTTCTGTTAA
55277
55278
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTGTAAAGATGACCCTACGGTTAAAGAATTTTCTAGAATC
55353
55354
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTTTTTCAGTCACAATCAGAAAAATTCTATAAAGAATTGAGT
55431
55432
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TGAGAGAAGAGAAAAAGTATGTTCACGCCTTTGTACAAGG
55507
55508
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GAAACAATATCAGAGTCAACTCCAATAGGACCACCAAAGA
55583
55584
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTACGGGCACGCCTGTGGCAATTCACCTTTGACGAAGTG
55658
55659
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AGATTAGCTAGAACCTCACGCAAGGGACTAAAGTGG
55730
55731
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CACAGTTGCGTAAGCTCTTGGTGAGACAACTAAAGGCCCATGCCAA
55812
55813
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTTGTTCACCATTGACGCAGTATTGCGTCTGGTAAACTTA
55888
55889
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TGGAATTGTTGGAGTCCCCCCCACTTATTAGCGGC
55959
55960
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
ATCGTGTTAGTCAAGTATTTATATATGATTACAGCTACT
56034
56035
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AATAGCTAATGATAGGCAGGGTTGCGTCTGCCTTACCAAC
56110
56111
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTCCACCCTGGTTGTTAAGGTAGGGAATCTTGTTTGGAG
56185
56186
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTCCACCCTGGTTGTTAAGGTAGGGAATCTTGTTTGGAG
56260
56261
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GTCGCTGAACGGGAACCCGAACCAGAACTAGAGGAGTT
56334
56335
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GTCGCTGAACGGGAACCCGAACCAGAACTAGAGGAGTT
56408
56409
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
ATTGGTCTCAATATGAGCTAACTGCCGATCAGTTAGA
56481
56482
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CGCATTAGCATTCTTACGGGCAATGAATAGTTTTTCCTCAGGGAG
56562
56563
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AATGACCTGTCTCTTCAGTACGGGTAGGTCAATTCCCGTA
56638
56639
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CGGGTAAAGGATTGGTTCGATACGACTATACAGCTCAAAAGG
56716
56717
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTGATTACAGCGCAATGACAGTGCGTGAATTGCGTGCGCTGTGCTCTT
56800
56801
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTCAAGTGAAACGCCGTAACAAGTCCGTATTGGCCAACCT
56876
56877
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTATGTTCGGTTTTATCTCTAATTTATTCACTTCTA
56948
56949
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CGGTTGATTCTTTGGTACAGTTTGACCAAGTAACTACTGC
57024
57025
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GTACATTTATGTAAATAGCAATTACCTAAATGCTGAGCTGCGT
57103
57104
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AGGTTCAGCCAAATCAATGGGCTGGAGGAAGAATACGTT
57178
57179
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CGAGCACGCGCTGGCGCTCGACGCGGCGCCGTCGATCTCGCTGTTCTGGCTCGCCACGCGCCCCGACGGCCA
57286
57287
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AATTAATGGTTTAGTTGATGTAACTCTTCGTCTTAAGGCTGA
57364
57365
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CTACCTCAACTTTTGTAGACGGCGACGGAAAACGACCTGTT
57441
57442
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GATTTTTAATCCTGTAATGTGTCGAGGGTGCTGCC
57512
57513
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTGATGTGTAATTGGGAAGACGTCGCGGCTATTGAGGC
57586
57587
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TCTACTATGAATTAAGTCATCTAATGACATGTGATGACT
57661
57662
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GTACATTTATGTAAATAGCAATTACCTAAATGCTGAGCTGCGT
57740
57741
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AGGTTCAGCCAAATCAATGGGCTGGAGGAAGAATACGTT
57815
57816
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CGAGCACGCGCTGGCGCTCGACGCGGCGCCGTCGATCTCGCTGTTCTGGCTCGCCACGCGCCCCGACGGCCA
57923
57924
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AATTAATGGTTTAGTTGATGTAACTCTTCGTCTTAAGGCTGA
58001
58002
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CTACCTCAACTTTGTAGACGGCGACGGAAAACGACCTGTT
58077
58078
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GATTTTTAATCCTGTAATGTGTCGAGGGTGCTGCC
58148
58149
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTGATGTGTAATTGGGAAGACGTCGCGGCTATTGAGGC
58222
58223
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TGACCGTAAGTGGGATCCGACGTCTTTGGATGTCAAAGTC
58298
58299
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CTCAAGAAAGCCACCCGTGTTGGTGAAGTTATCATGGGTAAA
58376
58377
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTCTCCTACTTCTTTTAAGAAGAAAGCCGCAGAAATGTGTGC
58454
58455
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTTCCCTCTACAAAGAGATGACCCGTAAGCCCATGAGCCGCAA
58533
58534
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AAAAAAGTTCTAGGGGCTTTTGGCTTTCTCAAGTATTTGGA
58610
58611
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AGATCTTTATTGAGGAGGAGGTGTTACAACCTCCAA
58682
58683
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CCCCGAAGACGGGGGTGAAGTGTTCTACAGCTGCCTTCAA
58758
58759
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GACTACGGTAGCTACGGTTACCTAGTCTTCGCTAGAGGCGAA
58836
58837
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GCCTTTCGGCTTTTAGACGGACTCATACTACCTCCA
58908
58909
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GGATTGAGGTTGACGTACAACCTATAGAAAAAGAGATAGATG
58986
58987
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AGGGGAATGGATTCTAGATCTGATACCTTGGGAATA
59058
59059
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AACCTTATAGCCGTAAGCCTATCCTCAAGAAAGGTAAG
59132
59133
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTTATTCAAGATAATTGTGTTGCAGAAGTGATTGTTAGAATCTAAA
59214
59215
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GTCCAATGGGGACTGCATTATGCAGGGGGGTCTAAAGAAACT
59292
59293
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AATACTCCGTTTTAGGATTAAATGAAGCTTATTTGGCTTCATT
59371
59372
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TCAGCAGTGAGGGGAGCGGTAGCAAATAGATTAGAGATA
59446
59447
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CATTGAGTGAAAGCGTTGTCTGTTTCCAAGAAATCTACTAC
59523
59524
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AGGCTTAAAATTATGTCTAACGTTATCACTAGAGAAGA
59597
59598
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TCATTGTCACCTTCGTTAGAAGCAGCCCACACTAGAGGATCTA
59676
59677
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TATGTCTAACATTTGTGTCGATTTTGATCGTGCTTGGG
59750
59751
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GGTTCCATTGATTGTTAGCACAGGTTTATTTGATTATT
59824
59825
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TAACCCACTTTTCCTAATCCGACTCTCCCCACCCTGTCGG
59900
59901
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
ACCCTCAAGGAGTTCTCAAAGAAGGCTATTCTGATCAT
59974
59975
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTAATTCAAACTGAGGACGTGCCCTCAGATATGAGAGAA
60049
60050
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CACATTTACAGGAAAACCAAAATGACTACGAAGCAACAAAA
60126
60127
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CAACTGCGTTAAGCCCCGCACTACAGCACGCTGTTTTGAGACAGC
60207
60208
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTTTGAAACAATCAAAAGAGAGCAGCGGCCTTTATATTC
60282
60283
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
ACTCTGGGAAGTTCTTCTCCTTTACCCCAGGGCGA
60353
60354
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CTTCAACTGTTGCGCAGACAATTGCTGCTGCTCCTCAGTAT
60430
60431
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
AATAAACCCACTGCAAAGGAATATAAATCGCTTAGAGG
60504
60505
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TCAAAGCGCATACCTTGAATGTTAGCAGTGCCCTTAAGAGCC
60582
60583
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
ATATAAACACCCTGTACAATTACGATTTAAAATCGTCTCAA
60659
60660
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
CCGATAGAACCCGACAATCATTTCCGCGTCTTGTTCAAT
60734
60735
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTCTACCTGAACTGGAGCACTATCTCAGTGAAGTCAAGGCA
60811
60812
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
ACATGTTTGATCTAACTAATGGTTTAGTTGATGTCACTCTT
60888
60889
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TGCTAATCTAAAAGGGCTATCAATTGAGATAGCCCTTTT
60963
60964
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TCGTCAAGAAGATTGGAGACTGGGTTATTCTCCAAATCGA
61039
61040
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTCGGCTAACATGTGAACTGGCAGGGCGTGAGCCCATA
61113
61114
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
GTCTGAGTTGGATAAAGCTGATTGGGATATACAGAATCA
61188
61189
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
TTAGCACTCTTCGTATTCCCTCTGAAGTTCGCAAGGTGG
61263
61264
GTTTCCAATCTATTTGCTTCTCAGGTGAAGAGAAAC
61299
Left flanking sequence : Till position 54528 (length
bp)
AAAAAAACGAAAGAGATTTTTAATCATTGATTAATTTTGAATGGCTTTGCTGAAAAAAAATGGCGCGCCT
AAAGATTAGTTGGCTACGCCATATCCATTA
Right flanking sequence : From position 61299 (length
bp)
CGCTGGCCTTTCAAAGGCTTGTCCGGAGAGAACTCCAGCGAGCATTTGCGACCGATAGCAAAATTTTACC
AGGCTCCAACAGAAAAGGCCAGAAAAAAAT
Print the CRISPR sequence : From position
bp To position
bp