Institut de Génétique et Microbiologie

CRISPR details


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Université Paris Sud

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NC_010524_1                                                                                                                 top


Strain : Leptothrix cholodnii SP-6 RefSeq :NC_010524 (chromosome circular)
CRISPR id : NC_010524_1
DR consensus (37 bp) : GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACNumber of repetitions :69
Begin Position : 1231964 End Position : 1236875

1231964GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGCTGGCCGGCTGCCGGTGCACCGCGTGCGCGATCG 1232035
1232036GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACACGGCGCCAAGGTCGACGCCGAGCACCTCTCGGTG 1232107
1232108GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGCCGTGCAGACCGACGAGGTCTTCACCCTGGCCAA 1232179
1232180GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGGTGCGTGGCTTCCCACAGCCAGGCGCCCAGTCT 1232250
1232251GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCTTCGGCTCGTAGCCGAACTTTTCCTTGAACTT 1232321
1232322GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGGCCTGTGGCCCGGAGCCGGAGCCAGTGAGTACCTC 1232394
1232395GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGACCTGAAGGGCCTCGTCTCGCTCGGCTACGGCAC 1232466
1232467GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTTGATCGTCTTGTGGCGCTCGATGATCGAGTGGT 1232537
1232538GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCTTCACGCCGTCTGCAATGGCCGAATCAGCCTGCA 1232609
1232610GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGATCGCCTTGATATTCGCAATCGACTGATCGAAT 1232680
1232681GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGGATTGCAGCTTGTCGGGCGAGCCTTCGGCCGAGCT 1232753
1232754GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACATGAGTCGCGCTATTCGCTATCTTCTGCAGACGTC 1232825
1232826GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGCCGCGTGATGCGCTACTCCACCGAGCAACTTCGT 1232897
1232898GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGGGCCTGCTCGACATGTACCGCGTGTACGCGCGCT 1232969
1232970GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGGCATGCAGATCACGATCACGATCGGCGGCGTCG 1233040
1233041GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCAGCGGCAGGCCTTCCTCGACCAGCTTGCTGGC 1233110
1233111GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCGCCTGGATGACGCAGGACGAGGTGCGAAGCATT 1233181
1233182GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGCCAGTCGAGGCGGCCGATGAGCAGGCAGCACAG 1233252
1233253GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGGACATGACGACCGACGAGCGCACGCACATTCGGAT 1233325
1233326GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGACACGACGAGCGATAGGCGTGACCATGCCCAAGAG 1233398
1233399GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTTCTTGGCGCCGGTCATGTCGATCTCCTTGGCGAT 1233470
1233471GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCTCAACGCCAGCAATGACAGTACCGACAACGGGAA 1233542
1233543GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCAGCACGAAGCCTCATACGGCCGCCCTCAGCCAA 1233613
1233614GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACAAGCTCATCAGTGCCCAGTTGCTGCGCAAGCGAT 1233684
1233685GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTCCTGGTTTCCGGCGGTACCGAATGCGTGACGAT 1233755
1233756GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGCGATGGGCGGCGCGGGGTGTCCTGCGCCATTGC 1233826
1233827GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCGCACCGGCGCCGGCCAGGTTGCCGTGGTTGGCGTG 1233900
1233901GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTGCCCAGCAAGCTCGGCATCAACCGGCTCGATAC 1233971
1233972GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGACAGCGAGCCGGTCACCCAGGCTACCTGCGCATC 1234043
1234044GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGTTCTTGCTTCGGTCGTCCAGATGGCAATAACTG 1234114
1234115GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCTTGTACTGCCAACCCGGATCGCCTCGGCTGCAT 1234185
1234186GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTTGCCCATCGCCACCGCCTCATCGATCACATGCGC 1234257
1234258GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCATGATGTGCGCGTGCCGCAGGACACTACAACTG 1234328
1234329GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGTTCTACAGCACCCGCCGCGTTGGCGGTGGTGCCGT 1234401
1234402GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACATGCGCAGCTGCAGGTATGCGGCATCCTTGGCACG 1234473
1234474GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCAAGACCATTGCGAGCACATCCTCGCAATGGTCG 1234545
1234546GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCCGCGATCTGGCGATCGAGCAGATCAACGAGAT 1234616
1234617GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCGGCTGTCAGGCCGGTCAGCACCGCGGGCAGCGT 1234687
1234688GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGCAGTGCTGTCGTGATAACCGAGACGGCAGCAGCA 1234759
1234760GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGTCCTCGGCTTCGGAGATCGGCTTGGTGATGTCGGT 1234832
1234833GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCGGTGCTGGTGGCGCCCGTGCGCAACGCCGCCG 1234903
1234904GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACAGCGTTTCACCGGCCGCCAGCGGGATCGTGATCGA 1234975
1234976GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACACTGCTCAGTTGGGCGGGTTGAAGATTGAAAGG 1235045
1235046GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCATCCATCTCCACCAATATGCGGAGGTGCTTGTT 1235117
1235118GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGACGGGGGCGTCGAGAACGGCGGTGGTCATGACGG 1235189
1235190GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTGGCGTTGTGGGGGTAGATGCCGTAGGGCGTCAG 1235260
1235261GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCACGAGTCATGATGTTTTGCGCCCGAGCGGAGACG 1235333
1235334GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTAGCCGACCATTCGTGATCTGCCGCGAAAACGTCG 1235405
1235406GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACAGCAGGCCGCAGGGCTTGGCGCCGGCGGTGACGCG 1235477
1235478GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACAAAGGGGCGCTTGCGCAGGGGATTACCATGACAGG 1235549
1235550GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTCGATCACCTGCTGCGCCACCTCGGGCTGCACGGT 1235621
1235622GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCGGGGCCGGTGAACGCGATGCGGCCGGTGCGCTT 1235692
1235693GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCGTGCATCACGCTGGCCGAGGCCAAGCTGCATCT 1235763
1235764GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCAGCCGCCCTTCTGATCCGTGAAGTTGTTGCCGGT 1235836
1235837GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCTGGCGCGGTTCGAGCGCATCAACTCCAAGGGCGA 1235908
1235909GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTTGCCGTAGGCCAGCGTCCAGCTGTTGTGCACCAT 1235980
1235981GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGGCCGGTGGTGGTGGTCGAGGGCGAGAAGTGCGCC 1236052
1236053GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTTTCGGCGGCACGATCACGTATCGTGGTGGCCGC 1236123
1236124GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGGCCATGGGGGCTCCTATGTGGGGGTGAGGTCTTG 1236195
1236196GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGTGCTGGGCGGCATGCTGCCGAGGATCATTTCCGC 1236267
1236268GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGGGCTGTTCTTGCCGCTGCCGCTGTTGGTGATCAT 1236339
1236340GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCGGTGCGTGGGCAGGTGGCGTAATCTGGGCTGGC 1236410
1236411GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACTCCTTGGGGTTGGTCTCTGTGGCCGCTGGCTGGCT 1236482
1236483GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCCTGCGCCGCGTGCAGAGCACGCTCGACTTGTC 1236553
1236554GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCTTGCATGACCTGCCGCCCTTCACCAAGGGCGAG 1236624
1236625GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACCCAGTCACAGTGGCGCCTGAGGCGGCCAGGCGCA 1236695
1236696GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACATCGCTACCCGCCTGGGGTGCCGCTGATGCAAACC 1236767
1236768GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGACGACGTTGGATCGCCGCTCAATCCAGCCGGCGGCA 1236838
1236839GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC1236875
Left flanking sequence : Till position 1231964 (length bp)
GGAAGATTGTTCGGTGTGCGGGGCAGTTGTGGGTGCAGTTGAGTCAGACTCATGGGCGGTTGAGCAGCGC
AGCCGGCTACGTCGCGAAGTACATCGCAAA
Right flanking sequence : From position 1236875 (length bp)
TCCGCGTGTCCAAGTCCTTGAAAACCTTGCCCAACTTGCGCGTTGCGCGCGAACCTGGACGGCGGTTCCT
TGCGATTCAGAGCCATCAGCGATGACCGCT

Print the CRISPR sequence : From position bp To position bp