CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_010524_1
Flanking alignement tool
Page manual
  
Home Page
NC_010524_1                                                                                                                 
top
Strain :
Leptothrix cholodnii SP-6
RefSeq :
NC_010524 (chromosome circular)
CRISPR id :
NC_010524_1
DR consensus (37 bp) :
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
Number of repetitions :
69
Begin Position :
1231964
End Position :
1236875
1231964
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GCTGGCCGGCTGCCGGTGCACCGCGTGCGCGATCG
1232035
1232036
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
ACGGCGCCAAGGTCGACGCCGAGCACCTCTCGGTG
1232107
1232108
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GCCGTGCAGACCGACGAGGTCTTCACCCTGGCCAA
1232179
1232180
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GGTGCGTGGCTTCCCACAGCCAGGCGCCCAGTCT
1232250
1232251
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCTTCGGCTCGTAGCCGAACTTTTCCTTGAACTT
1232321
1232322
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GGCCTGTGGCCCGGAGCCGGAGCCAGTGAGTACCTC
1232394
1232395
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GACCTGAAGGGCCTCGTCTCGCTCGGCTACGGCAC
1232466
1232467
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TTGATCGTCTTGTGGCGCTCGATGATCGAGTGGT
1232537
1232538
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CTTCACGCCGTCTGCAATGGCCGAATCAGCCTGCA
1232609
1232610
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GATCGCCTTGATATTCGCAATCGACTGATCGAAT
1232680
1232681
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GGATTGCAGCTTGTCGGGCGAGCCTTCGGCCGAGCT
1232753
1232754
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
ATGAGTCGCGCTATTCGCTATCTTCTGCAGACGTC
1232825
1232826
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GCCGCGTGATGCGCTACTCCACCGAGCAACTTCGT
1232897
1232898
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GGGCCTGCTCGACATGTACCGCGTGTACGCGCGCT
1232969
1232970
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GGCATGCAGATCACGATCACGATCGGCGGCGTCG
1233040
1233041
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CAGCGGCAGGCCTTCCTCGACCAGCTTGCTGGC
1233110
1233111
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CGCCTGGATGACGCAGGACGAGGTGCGAAGCATT
1233181
1233182
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GCCAGTCGAGGCGGCCGATGAGCAGGCAGCACAG
1233252
1233253
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GGACATGACGACCGACGAGCGCACGCACATTCGGAT
1233325
1233326
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GACACGACGAGCGATAGGCGTGACCATGCCCAAGAG
1233398
1233399
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TTCTTGGCGCCGGTCATGTCGATCTCCTTGGCGAT
1233470
1233471
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CTCAACGCCAGCAATGACAGTACCGACAACGGGAA
1233542
1233543
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CAGCACGAAGCCTCATACGGCCGCCCTCAGCCAA
1233613
1233614
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
AAGCTCATCAGTGCCCAGTTGCTGCGCAAGCGAT
1233684
1233685
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TCCTGGTTTCCGGCGGTACCGAATGCGTGACGAT
1233755
1233756
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GCGATGGGCGGCGCGGGGTGTCCTGCGCCATTGC
1233826
1233827
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCGCACCGGCGCCGGCCAGGTTGCCGTGGTTGGCGTG
1233900
1233901
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TGCCCAGCAAGCTCGGCATCAACCGGCTCGATAC
1233971
1233972
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GACAGCGAGCCGGTCACCCAGGCTACCTGCGCATC
1234043
1234044
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GTTCTTGCTTCGGTCGTCCAGATGGCAATAACTG
1234114
1234115
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CTTGTACTGCCAACCCGGATCGCCTCGGCTGCAT
1234185
1234186
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TTGCCCATCGCCACCGCCTCATCGATCACATGCGC
1234257
1234258
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CATGATGTGCGCGTGCCGCAGGACACTACAACTG
1234328
1234329
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GTTCTACAGCACCCGCCGCGTTGGCGGTGGTGCCGT
1234401
1234402
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
ATGCGCAGCTGCAGGTATGCGGCATCCTTGGCACG
1234473
1234474
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCAAGACCATTGCGAGCACATCCTCGCAATGGTCG
1234545
1234546
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCCGCGATCTGGCGATCGAGCAGATCAACGAGAT
1234616
1234617
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CGGCTGTCAGGCCGGTCAGCACCGCGGGCAGCGT
1234687
1234688
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GCAGTGCTGTCGTGATAACCGAGACGGCAGCAGCA
1234759
1234760
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GTCCTCGGCTTCGGAGATCGGCTTGGTGATGTCGGT
1234832
1234833
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCGGTGCTGGTGGCGCCCGTGCGCAACGCCGCCG
1234903
1234904
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
AGCGTTTCACCGGCCGCCAGCGGGATCGTGATCGA
1234975
1234976
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
ACTGCTCAGTTGGGCGGGTTGAAGATTGAAAGG
1235045
1235046
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCATCCATCTCCACCAATATGCGGAGGTGCTTGTT
1235117
1235118
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GACGGGGGCGTCGAGAACGGCGGTGGTCATGACGG
1235189
1235190
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TGGCGTTGTGGGGGTAGATGCCGTAGGGCGTCAG
1235260
1235261
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCACGAGTCATGATGTTTTGCGCCCGAGCGGAGACG
1235333
1235334
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TAGCCGACCATTCGTGATCTGCCGCGAAAACGTCG
1235405
1235406
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
AGCAGGCCGCAGGGCTTGGCGCCGGCGGTGACGCG
1235477
1235478
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
AAAGGGGCGCTTGCGCAGGGGATTACCATGACAGG
1235549
1235550
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TCGATCACCTGCTGCGCCACCTCGGGCTGCACGGT
1235621
1235622
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CGGGGCCGGTGAACGCGATGCGGCCGGTGCGCTT
1235692
1235693
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CGTGCATCACGCTGGCCGAGGCCAAGCTGCATCT
1235763
1235764
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCAGCCGCCCTTCTGATCCGTGAAGTTGTTGCCGGT
1235836
1235837
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CTGGCGCGGTTCGAGCGCATCAACTCCAAGGGCGA
1235908
1235909
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TTGCCGTAGGCCAGCGTCCAGCTGTTGTGCACCAT
1235980
1235981
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GGCCGGTGGTGGTGGTCGAGGGCGAGAAGTGCGCC
1236052
1236053
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TTTCGGCGGCACGATCACGTATCGTGGTGGCCGC
1236123
1236124
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GGCCATGGGGGCTCCTATGTGGGGGTGAGGTCTTG
1236195
1236196
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GTGCTGGGCGGCATGCTGCCGAGGATCATTTCCGC
1236267
1236268
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GGGCTGTTCTTGCCGCTGCCGCTGTTGGTGATCAT
1236339
1236340
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CGGTGCGTGGGCAGGTGGCGTAATCTGGGCTGGC
1236410
1236411
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
TCCTTGGGGTTGGTCTCTGTGGCCGCTGGCTGGCT
1236482
1236483
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCCTGCGCCGCGTGCAGAGCACGCTCGACTTGTC
1236553
1236554
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CTTGCATGACCTGCCGCCCTTCACCAAGGGCGAG
1236624
1236625
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
CCAGTCACAGTGGCGCCTGAGGCGGCCAGGCGCA
1236695
1236696
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
ATCGCTACCCGCCTGGGGTGCCGCTGATGCAAACC
1236767
1236768
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
GACGTTGGATCGCCGCTCAATCCAGCCGGCGGCA
1236838
1236839
GTTTCAATCCACGCCCGCCAGTTTCCCGGCGAGCGAC
1236875
Left flanking sequence : Till position 1231964 (length
bp)
GGAAGATTGTTCGGTGTGCGGGGCAGTTGTGGGTGCAGTTGAGTCAGACTCATGGGCGGTTGAGCAGCGC
AGCCGGCTACGTCGCGAAGTACATCGCAAA
Right flanking sequence : From position 1236875 (length
bp)
TCCGCGTGTCCAAGTCCTTGAAAACCTTGCCCAACTTGCGCGTTGCGCGCGAACCTGGACGGCGGTTCCT
TGCGATTCAGAGCCATCAGCGATGACCGCT
Print the CRISPR sequence : From position
bp To position
bp