Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_010546_4                                                                                                                 top


Strain : Cyanothece sp. ATCC 51142 RefSeq :NC_010546 (chromosome circular )
CRISPR id : NC_010546_4
DR consensus (37 bp) : TATGGCCTAACCTTTGATGCCGTAAGGCGTTGATCACNumber of repetitions :5
Begin Position : 1203543 End Position : 1203863

1203543TATGGCCTAACCTTTGATGCCGTAAGGCGTTGATCACGACAAAAGCTAAGTTCAAAGATACTCCTGTTAG 1203612
1203613TATGGCCTAACCTTTGATGCCGTAAGGCGTTGATCACCTAATCCTCGCAGTGGTAGAGGTAATCAGTCTAAT 1203684
1203685TATGGCCTAACCTTTGATGCCGTAAGGCGTTGATCACAAAATCGATAATCTGATCTAACACTGGCCTATTTA 1203756
1203757AATGGCCTAACCTTTGATGCCGTAAGGCGTTGATCACGAAAAATGATGAGAGTATTGCGTAAGGCACTAA 1203826
1203827AATGGCCTAACCTTTGATGCCGTAAGGCGTTGATCAC1203863
Left flanking sequence : Till position 1203543 (length bp)
AACTCTGAACGGGTCACTTTTAGCCAGTCCCTAGCCATTTTGCGAAGGTGCTTGTAAAATTGATTAAGAG
CGTAGATTTATTAAGGCTTTCAGCCGTCGC
Right flanking sequence : From position 1203863 (length bp)
AATAGTAACGCTTCAGCTTAGTAGATCCCAATCTAATGGCCTAACCTTTGACAGACCGTACTCCTTATCT
ACTTTTATTAGAGTATTGGCATAATGAATA
Print the CRISPR sequence : From position bp To position bp