Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_010628_8                                                                                                                 top


Strain : Nostoc punctiforme PCC 73102 RefSeq :NC_010628 (chromosome circular)
CRISPR id : NC_010628_8
DR consensus (37 bp) : GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATNumber of repetitions :59
Begin Position : 1601611 End Position : 1605868

1601611GTTTCAATCCCTAATAGGGATTTTGATAAATTGCAATTCCCAAGAAAAATACGGCTATCAATATCAAGATA 1601681
1601682GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATAAGTTTGCTCTGATGCCATGCGATCGCTCCTTTGA 1601753
1601754GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCTTTCCTTGTCATCCTGTTCCCACTTACTATCCT 1601824
1601825GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTTGTCCCCCAAGGCGGTATAGGACTTGAATAAG 1601895
1601896GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCCCTAGTGGATGGTCAGGGTGTCCTATTCAGCAGAATAA 1601971
1601972GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATAAGGAGCGATCGCGTCTGATTTGATGAAGTTCCAGT 1602044
1602045GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATAGGCTTGGTAAAACTCAGGGGCACAAAGGTAGCCTTGG 1602119
1602120GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCTTATATGGTGAGGCTTCAGGGCTAGTTCCCTTCATAAAATCC 1602199
1602200GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATATCTTCTTAGCCCACAGCTAGGGCAAATCAAGAATAT 1602273
1602274GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATGAGAACGCCGCCCATCTGGGCTGTAAAGAGT 1602341
1602342GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTCGTAGTGGTCGATCGCTGGATGCCTTCTAGTAA 1602412
1602413GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCAATTACATCCATCTTTACCTGAGCCTAAGAATTT 1602484
1602485GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATATTGGTTTTTTGTAAAAAGCACGTCAACTAGTGATT 1602557
1602558GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATGTCCGCAGGTCTTCAGATAATCGAACAATTGGTTTGTCCTT 1602635
1602636GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCATCCAAGCGCGTTCTGCTTCGTTGAGTTGTTCAAAGCCAG 1602713
1602714GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTGGATAATTGCACCGCGAAGCATTTAAGCACTGG 1602785
1602786GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTCCGCGTTTCATTCGCTTGTTAGCGATCGCAGCTAA 1602858
1602859GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATAAGGTCAACATCAGCAAGAGTCAGCATACCGCTAAAA 1602932
1602933GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTATTTATTTCAAAGAAAAGATGCGGGTATTGATGTAA 1603006
1603007GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCCTGCGTATTGGCTTCGCTACACTTCTGGTAGTGAG 1603079
1603080GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATACGCGATCGCGGTTCGAGCATTTCCCCGTTATGTTCA 1603153
1603154GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCACTGATGTGCCAAAGGTAGATAGGCCCAAGAGAT 1603225
1603226GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCATTTCAAACTCAGAAAACTGAAGCTTTGCCAT 1603295
1603296GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTGAATGTCACTTTGTACAATCAAGTCTGTCACGTCT 1603369
1603370GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTGACCCCTCCCCCCACTGTGTGGTATGGTTGAAT 1603441
1603442GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTGTCAGTTCAAGCTGCTGTTCGTCAGGCTACTGT 1603513
1603514GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATAACTCGAAAGCCCCGCGAGGAAGCTTATCAGTT 1603583
1603584GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCTTATAGCGATCCGTTTCACCTTCACTACCGACAC 1603655
1603656GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATGATGATTTTTGCTGCTGTCCCCGTCATTTACCT 1603725
1603726GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATATTACATTTTGTTTTTGTGCTGAGGCAATTCTT 1603795
1603796GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCGGAGACTAAAGTTAGACTGAGCGTCTAAAACACCT 1603868
1603869GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCTTTACATCTTCACCTTGTCGTTCACTGCGATGT 1603939
1603940GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATATTAACGACCATCCAAGTAGCAACAATAGCTATAAA 1604012
1604013GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCCCCGGTGCAGAGGGGAGTGAGCTAGTTGCTATCAAA 1604086
1604087GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTTAATCCGCCCTGACAAAACCCTATACCCTCAA 1604157
1604158GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCACCCAGGGGATTTCCTTCCTGCGATCGTGGAATTTT 1604231
1604232GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATAGAATCCTCGGAGTATTCCGTCTGGGGACGTATTG 1604303
1604304GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTAATAGAGCTAATCAAAAGGGTGCAGGGCGATCGCCCTC 1604380
1604381GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTTTTTAATAGTATCACCAGCATCATTGTCATACTC 1604453
1604454GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATAAATTTAGCTTGCAGGCGATCGCTGTGAGCTAAGGA 1604526
1604527GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTCTCCTCCTCAATATCTTTAAGTTTTAGTTTCTT 1604597
1604598GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATAAGGGTTACACCCCAGGACTGCCCCAATTTATCCAA 1604670
1604671GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCTGCCCTTCCCAATGACTGGATTGGGAAAAAGATGGAT 1604745
1604746GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCGGGCATCAACTGTCATTCTGACCGATCGCCCATCA 1604818
1604819GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATACCGTTCAACTGCCTCTGCCACGCCCCCTCGTTAG 1604890
1604891GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTATTTGCAAGTGTGTGCTTTACCGCAGCTGCATAC 1604963
1604964GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCTTAGTGTATCCTCCCACCTCAACATATTCACCATGCATCT 1605041
1605042GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCACTTGCGATCGCTTGCTACTTTCCCGCCAAGC 1605111
1605112GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATGCGAAAAAAGATTCTACTACGGGGAAGTTTCCTAG 1605183
1605184GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATGTAATTGCAACCGAAGATTGCACTTTATGACTAA 1605254
1605255GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTTTACATGTCAAGACTTGCTAAAGATAAAGAGTTAAAG 1605329
1605330GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATATTGCGGCATTGAGGCATTCCAAAATGATTATTCAT 1605402
1605403GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTATAAAGTATGGAGTGCTGGCGAGTATTCCGAAA 1605473
1605474GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATGTTGGCGGCCAGCAGGGTCATCGACATCCTAAAAGA 1605546
1605547GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTATCTAAAGCAGTTTTAGGGTTCATAGCGACATTA 1605618
1605619GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTAATATTGAAGGCTATTTTGATATCCTCACCAGA 1605689
1605690GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATCACAGGCTTCTGCTATTTTCATGATTCTGATTGC 1605760
1605761GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAATTCTATCAATTGTATGAATAGCGATCGCCATATCC 1605831
1605832GTTTCAATCCCTAATAGGGATTTTGAGAAATTGCAAT1605868
Left flanking sequence : Till position 1601611 (length bp)
CAACAAATTAAGCTTGCTGCGCTACTACACAACTTTTAGTTTTTACTATTGATAAATTGCAATCCCCAGC
CAGCAGGAACCCCAAACGGACTGTAAACCA
Right flanking sequence : From position 1605868 (length bp)
AGCGGGAGCCTGAAACCCAAGCTGTATTTAGTTTTCAAGGTGCGGTTGCGCGATTCAAGGGCAATCATAG
CATTAGAGAATTTGTTTGGAAAGAGTGCCA
Print the CRISPR sequence : From position bp To position bp