Institut de Génétique et Microbiologie

CRISPR details


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Université Paris Sud

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NC_010717_1                                                                                                                 top


Strain : Xanthomonas oryzae pv. oryzae PXO99A RefSeq :NC_010717 (chromosome circular)
CRISPR id : NC_010717_1
DR consensus (31 bp) : GTCGCGTCCTCACGGGCGCGTGGATTGAAACNumber of repetitions :76
Begin Position : 4541190 End Position : 4546146

4541190CGGGCGCGTGGATTGAAACACCATGAACAACCAACCTTGCGCCCCCTGCTGGTGCAACAATCCTG 4541254
4541255ACGGGCGCGTGGATTGAAACCCATTTACAGATTGGCGGAATCGGTGGCGGTGCAGGCAGTGCTAC 4541319
4541320CGGGCGCGTGGATTGAAACATAATCAGAATACCACCAACGCTAGGGCAAGTCGCCCTGCTTGAGG 4541384
4541385ACGGGCGCGTGGATTGAAACCCGATCTTAAAGCAGTTATGTTGCCCTCAGCCTGGGTCACTCTGG 4541449
4541450ACGGGCGCGTGGATTGAAACGGGATCGATTTTGCAAGAGGAGCTAGAGCAAGCAGGTGCACCAC 4541513
4541514ACGGGCGCGTGGATTGAAACGGCCTCTAGTAAACAAGATCACTGAGAGGAGTTCCGCGAAATGAGCGA 4541581
4541582GGCGCGTGGATTGAAACTGCGCCGCGTGTTTGCAGTCTGTATTGCCGCCTGTCTGTCAAGCTGCTC 4541647
4541648GCGCGTGGATTGAAACATACAACCGCCGATTTCATTGTCAAAGAACAGATCAACATCTCCTTGGT 4541712
4541713GGGCGCGTGGATTGAAACTACAAGTACGCGCTTCTAGACAATTTTCACGGGCACAGGAGCGCTCACC 4541779
4541780GCGCGTGGATTGAAACTGTAGCGCGGCGTTCTCTTGCTCTTGCCCATGTTCTGGTTGTTCTGGG 4541843
4541844GGGCGCGTGGATTGAAACCAGGCCTCTGCCGTTGTGCTTCCTTGATCTTCTCATAGCGATTGGTATT 4541910
4541911GGCGCGTGGATTGAAACATGAAGTCCGGCATACATAGTTCCAAAATTCAGCCGATTCAGGCACAACA 4541977
4541978CGCGTGGATTGAAACTTGCACCAGCGCGTACATCACATTGTTCAGATCAAGGCTACCTGGCTCTGGCC 4542045
4542046CGTGGATTGAAACCGCTTCTCCGGATCAATATTCTTAATCCGGTAGTCGGAGGTGGAGAACGAGA 4542110
4542111CGCGTGGATTGAAACAGGAAACGGTCGCCATGCAAAGTAATGACTGATGGCCGAATTGAGAGCCT 4542175
4542176GCGCGTGGATTGAAACAGGCCACGGATCAGGCTGATCACAGGTGCAAACCGGTTTGGTTATGACAA 4542241
4542242CGCGTGGATTGAAACTTCAGCGCTGCGGACTTACGGGAGAGCTAGTCCCAATGATGCTCATTGGAG 4542307
4542308CGCGTGGATTGAAACACAGTGGCTGTTAGCTTGCCTGAGCCTTGTTTGGTTTTGTACCCAGTGGCT 4542373
4542374GCGTGGATTGAAACCGCAATATCCGAGACGGAGAAAATAGTTTGAAAAGGGGCTTGACAGCCGTCA 4542439
4542440CGCGTGGATTGAAACATGGAGGAGGCAGGCCGTCATCCTCATACAACTCAGCCTGCAAGTGCCTC 4542504
4542505GGCGCGTGGATTGAAACCTCAGACCGCTTTTACCACACTGCCTCATCAATACAAGATCCCCGTCG 4542569
4542570GGCGCGTGGATTGAAACCCAGTTTGCAGGCTTTGTAAAGCTCAGACATGGGGGCACCCTCTCCGC 4542634
4542635GGGCGCGTGGATTGAAACACCGCAGCCCGGTAAACACACCAAGATTTTGTGCACCCTGGAACCAAC 4542700
4542701GCGCGTGGATTGAAACTTCTCTATAGGTGCCACCATGAACAACCAAGTATTCGCCAACGCCACCCA 4542766
4542767GGCGCGTGGATTGAAACTACGAAGTGACGCGCCATTTACAGACAGGCCTGGGGGCGAGGTTGCA 4542830
4542831CGGGCGCGTGGATTGAAACGGGCAGAACAAGATAATCAGAATAGCCCCGGCGTTATAAATGGTGTG 4542896
4542897GGGCGCGTGGATTGAAACGCGTGCACGCAGGCCGATCTTAAACCCGCCAATATAGTTGTTGGCAT 4542961
4542962GGGCGCGTGGATTGAAACTCGCAACGCCCGCGGGATCGATTTGCCGGGCCTGCTCTTGCTGCGC 4543025
4543026ACGGGCGCGTGGATTGAAACGTGCACTACTTGGCCTCTAGTATCTTCTGTCCCCGGGCGGTGCTG 4543090
4543091CACGGGCGCGTGGATTGAAACGCCAAGAAGATGCGCCGCGTGTTTAACAAAATTACTGAGAGGAG 4543155
4543156CACGGGCGCGTGGATTGAAACTTGTGGGACAATACAACCGCCGATTTGCTACGCTGGCTCGGCGGTC 4543222
4543223ACGGGCGCGTGGATTGAAACAGAACATGAGTTACAAGTACGCGCCTGCGCGCGCAGCGGCGCCGG 4543287
4543288ACGGGCGCGTGGATTGAAACGCTACCACCTGTGTAGCGCGGCGTTCTCTGCGTCGGTCGCTGCTGC 4543353
4543354CGGGCGCGTGGATTGAAACCCCTTGGTGCCTCAGGCCTCTGCCGGGCGTTGGAATGACCGTTCGGC 4543419
4543420GGGCGCGTGGATTGAAACCACACCGACGGCGATGAAGTCCGGCATGGGCAATAGGCTCAGCACGT 4543484
4543485ACGGGCGCGTGGATTGAAACGGCACGGGGACTTGCACCAGCGCGTACACGCTGTATTCGCTACCCG 4543550
4543551ACGGGCGCGTGGATTGAAACAACGCGTTGTACGCTTCTCCGGATCAATAGGTCTGGCGGAGTAGAAA 4543617
4543618ACGGGCGCGTGGATTGAAACCGGCAATCGACAGGAAACGGTCGCCATTCGGCAGGCTGCGGCGCAG 4543683
4543684ACGGGCGCGTGGATTGAAACAGCGACGCAATAGGCCACGGATCAGGCGGTTATTCATGTACGAGG 4543748
4543749CTCACGGGCGCGTGGATTGAAACGCCAAGGGTTCAGCGCTGCGGACTCCATCACCAAGATGTGGTC 4543814
4543815TCACGGGCGCGTGGATTGAAACGCGCTTGCCACAGTGGCTGTTAGCTCCAGGACTGTGCTTGCAG 4543879
4543880TCACGGGCGCGTGGATTGAAACCACGCGCTACGCAATATCCGAGACGGTGTAGTTGTGGATAGACGA 4543946
4543947ACGGGCGCGTGGATTGAAACGTGCACTACTTATGGAGGAGGCAGGCCTGCATGGGCTGCAATTGGAC 4544013
4544014CGGGCGCGTGGATTGAAACGTGGCCCACGTCCTCAGACCGCTTTTTGAGCGTGTCACTGTACAGC 4544078
4544079CGGGCGCGTGGATTGAAACAAGCTGACTAGCCCAGTTTGCAGGCTTTTGGCCTGACTTGCGCTGGC 4544144
4544145CGGGCGCGTGGATTGAAACCCGACCTCAAGGACCGCAGCCCGGTAGGCCCACTATGTTGTCGGC 4544208
4544209CACGGGCGCGTGGATTGAAACACGTAGAACGTTCTCTATAGGTGCCTCACCCCTCGAACGTCGGCGA 4544275
4544276CACGGGCGCGTGGATTGAAACCTGCACATACTACGAAGTGACGCGCGTACCGTCCGCACGCTCCGC 4544341
4544342ACGGGCGCGTGGATTGAAACACCGCATCCCGGGGCAGAACAAGGGTGGCCGCGACGCGCTCTATG 4544406
4544407ACGGGCGCGTGGATTGAAACGCCCGACGGGTGCGTGCACGCAGGATGAGTCGGGTAAGTGGTGTA 4544471
4544472TCACGGGCGCGTGGATTGAAACCGCGACGGGTCGCAACGCCCGCCGCTGGTACTTCGGTCAATCTT 4544537
4544538CACGGGCGCGTGGATTGAAACGAGTGCCCGGGTGCACTACTTCACCAAAGATCGCGCCGACCCCAA 4544603
4544604ACGGGCGCGTGGATTGAAACATGACGCGTCAGCCAAGAAGACGGACACCACGCACGTTATCGCGC 4544668
4544669TGGATGCGTGAAGAACGAGCGCACCAATTCTTTGTGGGACACGGCAGATATGGAGATGTGGGAAAG 4544734
4544735CCGATCGGCCAGCTTCTCGCCACTGCGCAGCAGAACATGAGTGTCCAAACGCCTGACGCGCAGAC 4544799
4544800TCCACACCAACTCGTCGGGATTCAAGTCCGGGCTACCACCTGAACGGCGCTCGCCGCCGCCGACC 4544864
4544865CCCTTCAGGCTGTCCACGTCATCGCGCAAGCCCCTTGGTGCCTATTGTGCCTAAATCTAGGCACA 4544929
4544930TTAGCACGATCTTTCAGCACAGTCGCAGCCACACACCGACGGCGGCGGCGTGCGTACGTTGCGCCTC 4544996
4544997CACCGAGACCAGATCATGGCCATGAATCGTGGGCACGGGGACATCGGCGGTGCCGTCAGACGCTAG 4545062
4545063CTCAAGTGGTGCCCAGCTTGCTGGCCGCCGCAACGCGTTGTAAGCCTCGTGCCCGTGCTGCGTGATG 4545129
4545130TGATGTCACCATGTTCACCGCTGAAAGTGCGCGGCAATCGACGGCGATCTAGGCCCCGACGATTTA 4545195
4545196GACGGCGACGGCCTTTCATCATTCGCTTGAGAGCGACGCAATTGCACTACTGCTCGAAGAAGGCTGTA 4545263
4545264TACACGGCGAACCAGAACCCGCCCTTGCTGTGCCAAGGGCTGGACGAACCGGCGGATTCTGGCGG 4545328
4545329CCCCGGCACCGCGACAACCGGCGTGACGCCCGCGCTTGCCCAAGCCTGACATTTCGCACAACTCC 4545393
4545394CACGGAAGCCAGACTCGTCCCAGAAGTCAATCACGCGCTATAGCGGCCGTAGTTGCTACGTCCGG 4545458
4545459GCCGGGTAAGTCTGCTTTTCCCACTGTGCTAGTGCACTACTTCACCAAAGATCGCGCCGACCCCAA 4545524
4545525GGCTTCTGTGGGCTCAGCCCCAGCCGCGCCAGTGGCCCACGTCGAGTCGCAGGCGAAACGACCGC 4545589
4545590GGCACATTTCTTCTCGATCAGTTCACGCACGAAGCTGACTAGCTCGAAGAGCCAAGCGGCGATGAC 4545655
4545656CTGGCGAGGGTTCTTGCCATTGACCCAGCCGCCGACCTCAAGGCGCGTTCCTCCGGTTCGATCCAA 4545721
4545722CGGGCGACCGCTGCCTTTACGCGTCATCAATACGTAGAACGAGCGCTTGTTATAGCGCTCGCGCCAC 4545788
4545789TTGTACGCCCAGCCGCGATGCAGCCCGAACGCTGCACATACTCAATCAGGGCGCTGTCGGTGCGA 4545853
4545854CATCCGTTGCAACGCCATCAGGCGCATTTCTACCGCATCCCGGAAGACCCACAATGTTGTCCGCC 4545918
4545919TCTTCTTCATGGATGGTTGGACAGCAGACACGCCCGACGGGTATGAGCAAGTCTTTGCTGGGATACC 4545985
4545986CGCACAGAAAGTCACTTCTTCTGCAACAAACCGCGACGGGCTGGAGCTGGTAACCCCGTCGCAGA 4546050
4546051AAGCCAGACGCCGAGCTGCGTCATCAAGCCGGAGTGCCCGGGGTCGGTGTCAGCGCAGGCTGGCC 4546115
4546116ACAATCCACGATGTTTGTGCCACTCCACGAA4546146
Left flanking sequence : Till position 4541190 (length bp)
GACATGGGGGCACCCTCTCCGCGTCGCGTCCTCACGGGCGCGTGGATTGAAACAAACACACCAAGATTTT
GTGCACCCTGGAACCAACGTCGCGTCCTCA
Right flanking sequence : From position 4546146 (length bp)
AAATGGCCGCGCGCGGCTGGAGACGCCGCGCACATGCACTACCTGCAGATCGTTGGCCACCGCAACCAGG
GCACCGGCCTGGCGGGCACGCCGGCACAGG

Print the CRISPR sequence : From position bp To position bp