Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_010729_10                                                                                                                 top


Strain : Porphyromonas gingivalis ATCC 33277 RefSeq :NC_010729 (chromosome circular)
CRISPR id : NC_010729_10
DR consensus (37 bp) : GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGNumber of repetitions :2
Begin Position : 2129520 End Position : 2129628

2129520GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAGAGAAGTTTTAAGATCTCTTTCAGAAAAAAATCTGA 2129591
2129592GTCTTAATAGCCTTACGGACTGTGTATGTATAGTGAG2129628
Left flanking sequence : Till position 2129520 (length bp)
TGCCATAGAGCACAAGAAGCCCGGGCATGCGCTTAAGATTGTAGGCCATCGCTTCCAGAACACTCTGTGT
ATGCGTTCGTTCTAACCCTCGGTAATCAGT
Right flanking sequence : From position 2129628 (length bp)
TTCTTTAAAACAATATTAATAACACGTCAGTTCGACGTAAGAAAAAGCCAATGAATTTGTTTTCTGATTA
GTGGTAAACGCCCAAAGAACGTGGGCATTA
Print the CRISPR sequence : From position bp To position bp