Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_010831_1                                                                                                                 top


Strain : Chlorobium phaeobacteroides BS1 RefSeq :NC_010831 (chromosome circular)
CRISPR id : NC_010831_1
DR consensus (35 bp) : GTAGGAAGACCCGATTAGCTACAGGGGATTGAGACNumber of repetitions :8
Begin Position : 1353854 End Position : 1354412

1353854GTAGGAAGACCCGATTAGCTACAGGGGATTGAGACTGACATCCGCTCGATCTTCAAGTTTTGGTTCGTACCAGTG 1353928
1353929GTAGGAAGACCCGATTAGCTACAGGGGATTGAGACCGGTATCCGAACGCAGCGCCGCCGTTCTCGAGCTCATGAA 1354003
1354004GTAGGAAGACCCGATTAGCTACAGGGGATTGAGACAGACAGAAATTTTATCAACACATACGACAAGAGAGGTG 1354076
1354077GTAGGAAGACCCGATTAGCTACAGGGGATTGAGACTCTTTTTTTCTCCTTGTGCCATAAGGCAACTCCTTTTG 1354149
1354150GTAGGAAGACCCGATTAGCTACAGGGGATTGAGACTGAATATCTGTGTCGTTGTTCGAGATGCTCCCATCATTACTT 1354226
1354227GTAGGAAGACCCGATTAGCTACAGGGGATTGAGACAATTGCAGAATTTTCATTATCTGCCCCGGTGTAATTTCCT 1354301
1354302GTAGGAAGACCCGATTAGCTACAGGGGATTGAGACTCCCGGATGATCTCCGGCGTGAGGAGTTCGAGCATCTCCTG 1354377
1354378GTAGGACGACCCGATTAGCTACAGGGGACAGGGGG1354412
Left flanking sequence : Till position 1353854 (length bp)
CGATGGAATATGCATGTTTGGTGACTTTTGGATCGATTTTCTCATGAGCCCTGGATATCGGGCTGTGAGC
CCTTGCCAGACAAGCGTTTCCGGAGGTACA
Right flanking sequence : From position 1354412 (length bp)
AAGTCGGCAGTCTACAGTTGGCAGTAGGCAGTTAAAGAGGTTCATAAGTGGTTGGGGAAGTGCTGAGCAA
TGAGTGCTGAGCGCGAGCGACGAGCAATGA
Print the CRISPR sequence : From position bp To position bp