Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_011059_6                                                                                                                 top


Strain : Prosthecochloris aestuarii DSM 271 RefSeq :NC_011059 (chromosome circular)
CRISPR id : NC_011059_6
DR consensus (37 bp) : GTCTCAATCCCCTTTATCCAAGCGGGTCTTCATCTACNumber of repetitions :7
Begin Position : 2189181 End Position : 2189643

2189181TCCCCCGTCCCCTTTATCCAAGCGGGTCTTCATCTACGTTAGGAAAAGCTGTTAAGCTCATCAAAAATGACG 2189252
2189253GTCTCAATCCCCTTTATCCAAGCGGGTCTTCATCTACAGAGCTTGGTTGCTTTCTGAGCGTCTCAAGAAGGG 2189324
2189325GTCTCAATCCCCTTTATCCAAGCGGGTCTTCATCTACCCGCATTGGCGAACGGGGCTCTGGAGGCGGCGGC 2189395
2189396GTCTCAATCCCCTTTATCCAAGCGGGTCTTCATCTACACTATACCCAACAGGCATACTTCCTCCTTAAGT 2189465
2189466GTCTCAATCCCCTTTATCCAAGCGGGTCTTCATCTACTATGCGGTTATCAGTGGAGGTGTTCCGATACCG 2189535
2189536GTCTCAATCCCCTTTATCCAAGCGGGTCTTCATCTACTCGTTACAGATAGTTTCCCAAGCGCGTATACAAG 2189606
2189607GTCTCAATCCCCTTTATCCAAGCGGGTCTTCATCTAC2189643
Left flanking sequence : Till position 2189181 (length bp)
ACCATTTGTCCGGGCAGGCACAGGGGCCTGCCCCTACAGCTGAATTCTGGCATCCCCTCAAAACTCATTG
CTCAGCACGAAGAACTAAGCACTCAGCACT
Right flanking sequence : From position 2189643 (length bp)
CGTCCCCTTTGCAGTCTTTATCCGGCGGGACTTTCCGGGCATTGTTGCGCGAACCTCCTTTTTTTGGTAA
TCGAAAAGCATGTTTTCAAGCTTCTGTTAT
Print the CRISPR sequence : From position bp To position bp