Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_011094_1                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 RefSeq :NC_011094 (chromosome circular)
CRISPR id : NC_011094_1
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :13
Begin Position : 2981949 End Position : 2982709

2981949GTGTTTATCCCCGCTGACGCGGGGAACACTTTTTAGAGGTGTACACACTGTCGGCCTTTTG 2982009
2982010CGGTTTATCCCCGCTGGCGCGGGGAACACCACCTTAGCGACGAAATTAAAACCGAGCTCAC 2982070
2982071CGGTTTATCCCCGCTGGCGCGGGGAACACGCTTTGCCCCATGCGTCCAGATCTTCAACGGG 2982131
2982132CGGTTTATCCCCGCTGGCGCGGGGAACACAGAAAATTATCACTGACGAGTGACAATAACTC 2982192
2982193CGGTTTATCCCCGCTGGCGCGGGGAACACGGAGGTGATCCGGGATTTAAACAAAATGATTA 2982253
2982254AGGTTTATCCCCGCTGGCGCGGGGAACACGGTTTACAGACCTCAATAAAAAGACGGCAGGC 2982314
2982315CGGTTTATCCCCGCTGGCGCGGGGAACACGTCAGCGCCGGCGATTGGGCCGCCGATTTTGT 2982375
2982376CGGTTTATCCCCGCTGGCGCGGGGAACACAATGCAATTTCCTGACTCCCCTAACCTCAAGG 2982436
2982437CGGTTTATCCCCGCTGGCGCGGGGAACACAAGTACCGGCAAGTGTGGTAGCGAAGGTTATG 2982497
2982498CGGTTTATCCCCGCTGGCGCGGGGAACACGCGCTTGATCTCCCGTTATCTAAGGGCCAATC 2982558
2982559CGGTTTATCCCCGCTGGCGCGGGGAACACGCATCGGTGGCGCTGGCCAGTTCAAAAATACG 2982619
2982620CGGTTTATCCCCGCTGGCGCGGGGAACACCTCAAACGAACGCAGTATTTGATCGGATGTTT 2982680
2982681CGGTTTATCCCCGCTGGCGCGGGGAACAC2982709
Left flanking sequence : Till position 2981949 (length bp)
GGCGAATTGAGCGCCGTAGCCGCGATGTAGTGCGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGGC
GGAAAAAACGTCCTGATAAGCTGGTGAAAC
Right flanking sequence : From position 2982709 (length bp)
TCTAAATCTACCCAATTGAATTTAAATACTTTTTTAGCGCACAAAAAAACCACCAACTTTTCCTAATTTT
TAAAGATCTCTAAATTATTGATTTTCAACA
Print the CRISPR sequence : From position bp To position bp