Institut de Génétique et Microbiologie

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NC_011653_12                                                                                                                 top


Strain : Thermosipho africanus TCF52B RefSeq :NC_011653 (chromosome circular)
CRISPR id : NC_011653_12
DR consensus (30 bp) : ATTTCAATTCCTACAAGGTAAGGTACAAACNumber of repetitions :55
Begin Position : 1959890 End Position : 1963518

1959890TTATCAATTCCTACAAGGTAAAGTAAAAACGACTAAAGGAGTGATGAGTATGATTGAGTTAATTGT 1959955
1959956ATTTCAATTCCTACAAGGTAAGGTACAAACAAGATTTACTACCCTAACACCTAAACCTAATGCACG 1960021
1960022ATTTCAATTCCTACAAGGTAAGGTACAAACACAAGAACCGCCTTCTATAAGTATTGATGCCAAACCAAA 1960090
1960091ATTTCAATTCCTACAAGGTAAGGTACAAACTTTTTTGTCCCAGCACAATACTGCCGTCGTTTCTGATTT 1960159
1960160GTTTCAATTCCTACAAGGTAAGGTACAAACAATACTCGATATCTTTTTCTCCATTTACATATAGTCG 1960226
1960227GTTTCAATTCCTACAAGGTAAGGTACAAACGCTTGAAACGTTAAAGGTAGAACGTGAACAAAATTT 1960292
1960293ATTTCAATTCCTACAAGGTAAGGTACAAACATTATTTCGAATGGGAATTTGAACAGCTAAACAACAGT 1960360
1960361ATTTCAATTCCTACAAGGTAAGGTACAAACTAAAAGACAGCGTCTATGAGCAAGTTATAACGCCGA 1960426
1960427ATTTCAATTCCTACAAGGTAAGGTACAAACTCTTTCCAATCCCAATCTTGTAACGGCCAATATTCT 1960492
1960493ATTTCAATTCCTACAAGGTAAGGTACAAACGAAAAAGAGTCTGATGGAGATGATAGCGAGGAAACTCA 1960560
1960561ATTTCAATTCCTACAAGGTAAGGTACAAACTATTATAACCTTTTTCTTTTGCTATTTCAATATATTT 1960627
1960628ATTTCAATTCCTACAAGGTAAGGTACAAACTAGTTTCCACACTTGATTCAGTAGCACAGAAATTAAA 1960694
1960695ATTTCAATTCCTACAAGGTAAGGTACAAACTAGTTTCCACACTTGATTCAGTAGCACAGAAATTAAA 1960761
1960762ATTTCAATTCCTACAAGGTAAGGTACAAACTATATTCTTCGGTAATTTCCCTTTTGATTTTGCAAAT 1960828
1960829ATTTCAATTCCTACAAGGTAAGGTACAAACGCATATGACAGCAGCACGACACAAGGAGGGGAAGGTA 1960895
1960896ATTTCAATTCCTACAAGGTAAGGTACAAACTCTAATCCATGAGTTGCATCTATTTGGTCTACCAT 1960960
1960961ATTTCAATTCCTACAAGGTAAGGTACAAACGGAAAGAGAGGTGGTATGTTGTTACTGAAAGAAAGT 1961026
1961027ATTTCAATTCCTACAAGGTAAGGTACAAACTTACGTAAAGCCGTTTCATGTTTAATCTTTCTACCA 1961092
1961093ATTTCAATTCCTACAAGGTAAGGTACAAACTTGTATCAAGACAGACAGTTGCGGAAGCGTTAGGAAT 1961159
1961160ATTTCAATTCCTACAAGGTAAGGTACAAACCAAATTTGGTTTGTGGCGTCACCAAAAAGTCTAGCGC 1961226
1961227ATTTCAATTCCTACAAGGTAAGGTACAAACAAGTCTTCTGCTGCAGATTTATACTGGTTGAAATGCA 1961293
1961294ATTTCAATTCCTACAAGGTAAGGTACAAACTAGAGCAAGTCAGAATATAGGGAAGGCTAAAGAAATAC 1961361
1961362ATTTCAATTCCTACAAGGTAAGGTACAAACTCGTGGAAACTTTACAGGAAATGTTTTATTCATAAA 1961427
1961428ATTTCAATTCCTACAAGGTAAGGTACAAACCTTCATAGTCTTCCAAATCTTGTGTAAAACTGTTGC 1961493
1961494ATTTCAATTCCTACAAGGTAAGGTACAAACTTTTTTATCACTCATACTTACACCTCCTTTTTTATT 1961559
1961560ATTTCAATTCCTACAAGGTAAGGTACAAACTAGCTTCAATGCTAAAACTTTTGTTTTGCAAATCTAT 1961626
1961627ATTTCAATTCCTACAAGGTAAGGTACAAACTCGTTTCTTTCCACAGTCCTTGCCAATCTAATGCGT 1961692
1961693ATTTCAATTCCTACAAGGTAAGGTACAAACGCACTTCATCGAATGGTTCTTTTATTCCTAAAAGT 1961757
1961758ATTTCAATTCCTACAAGGTAAGGTACAAACTTACAATAAACGATGATAAATTGCATTATTTAGCTG 1961823
1961824ATTTCAATTCCTACAAGGTAAGGTACAAACATAAGGCAGAAGACAAAACACTGCTTGTAAACAGAGT 1961890
1961891ATTTCAATTCCTACAAGGTAAGGTACAAACGTTGGAAGTGGCTTGTGGAGATATATCAAATTCCAA 1961956
1961957ATTTCAATTCCTACAAGGTAAGGTACAAACGAGATAATAGCAACAGATTATTCACTTATATTTGG 1962021
1962022ATTTCAATTCCTACAAGGTAAGGTACAAACAGCTTCAACCGTTAATCTAAACGATGCAACTTATTA 1962087
1962088ATTTCAATTCCTACAAGGTAAGGTACAAACGTATCTCTGTCAACGCGCATTCAGATACCTCAGGAAA 1962154
1962155ATTTCAATTCCTACAAGGTAAGGTACAAACTGTGCGATCTCCGTTAAAATACTTCTTAATAAAAGATC 1962222
1962223ATTTCAATTCCTACAAGGTAAGGTACAAACTAAATATAAGCGGAAGGTGCGAGAGGGTCTTTGAAAAG 1962290
1962291ATTTCAATTCCTACAAGGTAAGGTACAAACTCGCACCTTCCGCTTATATTTATACCACAGTCTTCCCT 1962358
1962359ATTTCAATTCCTACAAGGTAAGGTACAAACTTGGAACCAGAAAGAGGAATACTTAGAGTTTATAGA 1962424
1962425ATTTCAATTCCTACAAGGTAAGGTACAAACGCGAGACAATTGTATAATTCTTCGTCGATTGGTTCGG 1962491
1962492ATTTCAATTCCTACAAGGTAAGGTACAAACTTGGGTTTTTTAGATTCAAAGTTTGATATTGAAAATAT 1962559
1962560ATTTCAATTCCTACAAGGTAAGGTACAAACGTTCTTTCACTCAACTCCACCACGAGATATTGCTA 1962624
1962625ATTTCAATTCCTACAAGGTAAGGTACAAACTTAGTACAATTGTTTAGTATCTTTATTTTATGTCT 1962689
1962690ATTTCAATTCCTACAAGGTAAGGTACAAACGAACTCTTCCCACTCCGTAATAATAACACCGTCATCTT 1962757
1962758ATTTCAATTCCTACAAGGTAAGGTACAAACTACAAAGGAGGGGATTTTTATGGTTAAGTTTAAGGG 1962823
1962824ATTTCAATTCCTACAAGGTAAGGTACAAACAAAACATAACTTATTTTATTAAAAAGTATGCAGAACT 1962890
1962891ATTTCAATTCCTACAAGGTAAGGTACAAACCGTGTACTATTGCGATACAGATTCTATCATTACAGA 1962956
1962957ATTTCAATTCCTACAAGGTAAGGTACAAACGTAACTCGTGGAAACTTTACAGATGTTTTATTCATAGA 1963024
1963025ATTTCAATTCCTACAAGGTAAGGTACAAACGGATTGTGCTCGAAGGCAGTCGGTTCAGTAAAGCTG 1963090
1963091ATTTCAATTCCTACAAGGTAAGGTACAAACATGAGTTCCAAATTTTTCTTGCTCTTGCACAAAAATA 1963157
1963158ATTTCAATTCCTACAAGGTAAGGTACAAACAGAAACACCAGATAAATTTAAAGTAACAAAAGTAGA 1963223
1963224ATTTCAATTCCTACAAGGTAAGGTACAAACTTAGTTATAGCTTTATTTATTAGTAAGAAAAGCAA 1963288
1963289ATTTCAATTCCTACAAGGTAAGGTACAAACCGGTAATCAGGCGTTGCTGTTTCTGTGTAATACCC 1963353
1963354ATTTCAATTCCTACAAGGTAAGGTACAAACCATTACTAATAATAGTGCCAACCCGATTGTAGTAAGAGT 1963422
1963423ATTTCAATTCCTACAAGGTAAGGTACAAACAAAGTTCGGCATTCGTAAAGGATTTCCAAAATATTT 1963488
1963489ATTTCAATTCCTACAAGGTAAGGTACAAAC1963518
Left flanking sequence : Till position 1959890 (length bp)
TGCTTTATAATTTTAACAGAAACACAGTTATAATGAAAAAAACACCTCTATTAGTGGTATTTTATAAATT
CGGAGGTGTTTTTTTTAAAAATTCTTTTAT
Right flanking sequence : From position 1963518 (length bp)
CATAGTTTACGTTATAATTATATTACATTCTATTACTTTTTGCAACCTTTTTGAAAAAATCATAGCAAAA
AAATAAACAATATTAACGTAAAATATTTTA
Print the CRISPR sequence : From position bp To position bp