Institut de Génétique et Microbiologie

CRISPR details


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NC_011653_4                                                                                                                 top


Strain : Thermosipho africanus TCF52B RefSeq :NC_011653 (chromosome circular)
CRISPR id : NC_011653_4
DR consensus (30 bp) : GTTTAGAATCTACCTATGAGGAATGAAAACNumber of repetitions :46
Begin Position : 368612 End Position : 371819

368612GTTTAGAATCTACCTATGAGGAATGAAAACACAAGATCATCATCAATATCAACTTTCTTTAA 368673
368674GTTTAGAATCTACCTATGAGGAATGAAAACTATGCCAATTTTCATCTTTCCGCCCCCTTTTCATTC 368739
368740GTTTAGAATCTACCTATGAGGAATGAAAACCTCCAAGATATATTTGTTTCATTTTATCACCTCATTATAAA 368810
368811GTTTAGAATCTACCTATGAGGAATGAAAACCCAATTCGAGGTATTCAAAAAAATCACAATTTTTGAACTCCTC 368883
368884GTTTAGAATCTACCTATGAGGAATGAAAACACTAGTATTCTGAACCTTTTTGTTACTATACCTTTCATGTTTTCTC 368959
368960GTTTAGAATCTACCTATGAGGAATGAAAACTGAAAGAACTATTGTTCTTTTATCTAGGAGTTTTGCAAA 369028
369029GTTTAGAATCTACCTATGAGGAATGAAAACTAGTAGACTGTCATTCCGTCTACTTGTTCTTGATGAATATAAGA 369102
369103GTTTAGAATCTACCTATGAGGAATGAAAACGATTAGTGTTAAAGTGTAAATATTATTATCGCACAAATTATAT 369175
369176GTTTAGAATCTACCTATGAGGAATGAAAACTAGAAAAGCACCACCTACAAGCAACCAAAAGCCAAATTTGTTTCC 369250
369251GTTTAGAATCTACCTATGAGGAATGAAAACAGCTTCCGGGTCTGAGTTGTAGTCTTGGATAAATTGTTTA 369320
369321GTTTAGAATCTACCTATGAGGAATGAAAACTCAATATACTTCTCTATGTTGTCGTCATTATAGTTAT 369387
369388GTTTAGAATCTACCTATGAGGAATGAAAACTCTTTTATATTCTCTTCTAAAATTTTCATCTTTGTGTTAA 369457
369458GTTTAGAATCTACCTATGAGGAATGAAAACTTTGCAAAGAGATCGCCAGCATCTCCAAAGCTGGCAACCACGACCC 369533
369534GTTTAGAATCTACCTATGAGGAATGAAAACATATATTGTAGTAATGGAAACACAGATTGTCCTTCAAAAAACGATA 369609
369610GTTTAGAATCTACCTATGAGGAATGAAAACTGTGTCATACAATCTGGAAACCATCACATACATAATTACAC 369680
369681GTTTAGAATCTACCTATGAGGAATGAAAACGAAACCATCACATACATAATCACACCATCCTTTCTTTTG 369749
369750GTTTAGAATCTACCTATGAGGAATGAAAACCGGATTGTCGCAGAACAAAAGTGTTGGTAAAGTAAT 369815
369816GTTTAGAATCTACCTATGAGGAATGAAAACTTTTGAATCTCTTTGTCAGTTTACCTTTCATGTTTTCT 369883
369884GTTTAGAATCTACCTATGAGGAATGAAAACACCATAATACCCCTCCTTATTTTATTTTTTCGGAACCTTTTA 369955
369956GTTTAGAATCTACCTATGAGGAATGAAAACATACTTGCATCTCTCTGTTTCGATTGTTACTTGTAAATAATAT 370028
370029GTTTAGAATCTACCTATGAGGAATGAAAACGGCTCATTTTTGTGTTACGCAACGAAAATGTAGTTGTCACC 370099
370100GTTTAGAATCTACCTATGAGGAATGAAAACCACTCAGCCTCCGGGTCTGTGTTGTAATCTTGAATAAATTTT 370171
370172GTTTAGAATCTACCTATGAGGAATGAAAACGAATTCAATTGTTTTGTTTCCAATTTTTGCAAAGAGATCGC 370242
370243GTTTAGAATCTACCTATGAGGAATGAAAACCATTTATTTCATGGCATATTTTCGATGAAATATATAACA 370311
370312GTTTAGAATCTACCTATGAGGAATGAAAACCATTATATATGTGTGAAATATGCTGAGCGTTACCATTAATTCC 370384
370385GTTTAGAATCTACCTATGAGGAATGAAAACTCCAAGTTCGAGGTCTTCAAAATCTCTGAATTCCTTGAACTCC 370457
370458GTTTAGAATCTACCTATGAGGAATGAAAACAAGTTTTCTTGTGGTCTACAAATAATTTCAAGCTTCATACTTC 370530
370531GTTTAGAATCTACCTATGAGGAATGAAAACGCAACTTTGATTCCAAATTCCAAGTATTCAAAATAGTTACAATT 370604
370605GTTTAGAATCTACCTATGAGGAATGAAAACTTTTTGTTCCATCCTTATGTAAAATTTCATACTTC 370669
370670GTTTAGAATCTACCTATGAGGAATGAAAACAAAAAAAGCGGTGGGTCAAAACCCACCGCTTATTAAAAA 370738
370739GTTTAGAATCTACCTATGAGGAATGAAAACTTCTCTTCTTCTTCTTGCCTTGTCAACATATCTAATTTTTCTT 370811
370812GTTTAGAATCTACCTATGAGGAATGAAAACAGTCTTGCATGGCTTTTCGCAATTGTTCTACGAC 370875
370876GTTTAGAATCTACCTATGAGGAATGAAAACTAAGCTGAATAAGCCTACTTTTGTCATTGTCCTATT 370941
370942GTTTAGAATCTACCTATGAGGAATGAAAACTTATTCCATAGTCTTCCGATACTGTATCGATACTGTATC 371010
371011GTTTAGAATCTACCTATGAGGAATGAAAACCTGCATTCTGTACTAAACCTATAAGTTCAAAAATAGACGT 371080
371081GTTTAGAATCTACCTATGAGGAATGAAAACAACTGTTTTCGCGATTAACTTTGACCTCTCATCAGACG 371148
371149GTTTAGAATCTACCTATGAGGAATGAAAACGCCAGAACTAAGTTTTTGACGTTCTCCCAGGGAGCCAACCAT 371220
371221GTTTAGAATCTACCTATGAGGAATGAAAACACTTTATAAGATTCATAAATCTTTTTACTCATAATTTCTCCTC 371293
371294GTTTAGAATCTACCTATGAGGAATGAAAACGAGGTACTCCTATAGTGATTCCAAGAAGAGGCAAAACAACA 371364
371365GTTTAGAATCTACCTATGAGGAATGAAAACACTAGCAAAGCCAAAACGCCAGTCGAAATTTAGAAAAA 371432
371433GTTTAGAATCTACCTATGAGGAATGAAAACGAGGTACTCCTATAGTGATTCCAAGAAGAGGCAAAACAACA 371503
371504GTTTAGAATCTACCTATGAGGAATGAAAACACTAGCAAAGCCAAAACGCCAGTCGAAATTTAGAAAAA 371571
371572GTTTAGAATCTACCTATGAGGAATGAAAACTTGGTCGGATCCAAAACAAAAATCTTTCCCTTTCGACATTTTTTT 371646
371647GTTTAGAATCTACCTATGAGGAATGAAAACTCATCATCTGCGATTATCGCTAGAACTAAATTCCTTATGCACT 371719
371720GTTTAGAATCTACCTATGAGGAATGAAAACGTCATCATCTGCGATTATTGCCAAAACTAGGTTCTGGATA 371789
371790GTTTAGAATCTACCTATGAGGAATGAAAAC371819
Left flanking sequence : Till position 368612 (length bp)
AAATAAGAGCTCATAAATTCTAGATTTAACTCACCGTTTACTTCCACTCAAAGGTTTTGTTACTTTTTTT
TGTTATATTTATTTATGAGGATAGTTATAG
Right flanking sequence : From position 371819 (length bp)
TGCATAGTCCAAATTTTTCAAACTATTCTCACTTTTTTTGAAATCTAGTTATTGAAATTCCTGTATTGAT
TCTCACTGAAAAGTTTCATTAAAAATTTCT
Print the CRISPR sequence : From position bp To position bp