Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_011729_7                                                                                                                 top


Strain : Cyanothece sp. PCC 7424 RefSeq :NC_011729 (chromosome circular)
CRISPR id : NC_011729_7
DR consensus (36 bp) : GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGNumber of repetitions :17
Begin Position : 884072 End Position : 885274

884072TTTTTCAGTTATTCCTATTCAACCCAATAGGTAGGGCTTACCTTAAACAATTCGAGAGAGCGGAAAAGTTTA 884143
884144GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGGTTGGTTTGAAGGAGGACTAAAAGATTGGGCAAATGC 884216
884217GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGCGGCTGAAAAATCCGGTTTTACTGATCTCGATCGC 884287
884288GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGATATCCAGGGGATTACCGCACTTTATGATCTTCATCAGAT 884363
884364GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGTTTCAAGAATTTTTAAGAGGGCAATTCGCTGAAAA 884434
884435GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGACTTTGGTGTATTCCGATTAGATGGCGTTCCTCTTGA 884507
884508GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGCCGGTGCATATGCCATCGGGCCATTTACCTCCAAAGA 884580
884581GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGGTCAAACTAGGTAAACCTTATGAAATATAGCTACTTTAC 884655
884656GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGAATCCGTCAGGGAGTTGACAGCGATTGTTTCTCCG 884726
884727GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGCTGTCAAACTGTTCGAGGCCGAAAAGCCCAGCAGTAATGA 884802
884803GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGATGATGGGAACGGAAGCATATGATGCTACCGTTAAGGGTAA 884879
884880GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGCTTGTTTGTATTTTATTTACTTTAAGTTTGTCTTCA 884951
884952GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGAAGAAGCAAAAAATTCAAAAGCGCAAAGAATATTTC 885023
885024GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGACTTTTCCGGGCAAAAGGTCGAGCATTTCGGTCGAAC 885096
885097GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGTAAAGCCAATTGGTCTAGCAATACTTCCAGTAACTT 885168
885169GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGGAAGAGCCTGCCAAACCTAGGGTGTAAAACCGCCT 885238
885239GTTTCCAACAAGTCCTATTCAACCCAATAGGTAGGG885274
Left flanking sequence : Till position 884072 (length bp)
CAAAGACATAGAAGCAATTCTTTAGCAACTCAATACCCCCTACTTTTATTGACTTTCATAAGTAGAGGGA
TGAGTCACGCGCGATCGCAATTTTTCTAGG
Right flanking sequence : From position 885274 (length bp)
AGTTCGTCTGGCAGCCCAGACTCGGTAAAGGTTTCAGAGGACAAATCCACGCAACCCCAAAATAATTATA
CATTATCTCCCAAAAACAAGTAAAGCAGTG
Print the CRISPR sequence : From position bp To position bp