CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_011978_3
Flanking alignement tool
Page manual
  
Home Page
NC_011978_3                                                                                                                 
top
Strain :
Thermotoga neapolitana DSM 4359
RefSeq :
NC_011978 (chromosome circular)
CRISPR id :
NC_011978_3
DR consensus (30 bp) :
GTTTCCATACCTCAAAGGAAGTATTGAAAC
Number of repetitions :
7
Begin Position :
311329
End Position :
311756
311329
TTTCCTATACCTCTAAGAAAGGATTGAAAC
TTGACATTGTCAAAAGAACGTGGCACTAAACAACG
311393
311394
GTTTCCATACCTCTAAGGAAGTATTGAAAC
GATTAGTTTTTACCATGTATTGGTAATCTTGTCAAT
311459
311460
GTTTCCATACCTCAAAGGAAGTATTGAAAC
GGGAGTCCTACGTTGGATATCCACAGACGGCAGAGTACA
311528
311529
GTTTCCATACCTCAAAGGAAGTATTGAAAC
GTGGAGAAGGCTTTTATCTCAATGGATATCGTTGGTA
311595
311596
GTTTCCATACCTCAAAGGAAGTATTGAAAC
CGCGAAAGCAAAACTCCACGCCCTCAAAGCGCCTTT
311661
311662
GTTTCCATACCTCAAAGGAAGTATTGAAAC
TCAGTTCGAACACAACCTGGCGACGTTTGTCTCGT
311726
311727
GTTTCCATACCTCAAAGGAAGTATTGAAAC
311756
Left flanking sequence : Till position 311329 (length
bp)
CAGGATATCCCATACAGGGAGCAACACAAGGAGGGTATCGAAACATGGATTTGCAGTATGCGTGGGAAGG
ATTTTCATATCTCTTTGGAGCAACAAAATC
Right flanking sequence : From position 311756 (length
bp)
CCGTTGGATTTCAAAGAAATTATACCACAAAGCATTTCAAAAAGCAAGAGTATATGAGAACATACAGAGG
GTGTTTCATCACAGGTGATTCTAACACACA
Print the CRISPR sequence : From position
bp To position
bp