Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_012438_9                                                                                                                 top


Strain : Sulfurihydrogenibium azorense Az-Fu1 RefSeq :NC_012438 (chromosome circular)
CRISPR id : NC_012438_9
DR consensus (29 bp) : GTTTTCTCCCGACTATGAGGGAATTGAAGNumber of repetitions :8
Begin Position : 1081330 End Position : 1081816

1081330GTTTTCTCCCGACTATGAGGGAATTGAAGTCGGGATTCTGTTAATAAAATTAATAACAATCAAAA 1081394
1081395GTTTTCTCCCGACTATGAGGGAATTGAAGTCCCGATCTAGATGCTCAAGCATTTTGTCAAACAAAA 1081460
1081461GTTTTCTCCCGACTATGAGGGAATTGAAGAAAAAATTAAGATCTTAGAGCTTTCAGCGAATGAAA 1081525
1081526GTTTTCTCCCGACTATGAGGGAATTGAAGGCAGTCAATGATAAATCTTTGTTTACTCTGTATTTTG 1081591
1081592GTTTTCTCCCGACTATGAGGGAATTGAAGATAGCAAAACCTGCTATGCCAAATCAGGTAAATCAG 1081656
1081657GTTTTCTCCCGACTATGAGGGAATTGAAGTATATTAGAAAGGATTAAGTAATTGAAAAATAAGGG 1081721
1081722GTTTTCTCCCGACTATGAGGGAATTGAAGTAATAATGCCTCCTTTGATTTTAATTGTTTAATACC 1081786
1081787GTTTTTTCCCGACTATGAGGGTGAAGATG1081815
Left flanking sequence : Till position 1081330 (length bp)
TTGAAGTTTTATCAAACAAAACTAATTATAGGAGGTGTAATATGACAATAAAACTCTTCAAACATCAGGA
AGAAGCTATTACTCTTTATAAACAAAGAGA
Right flanking sequence : From position 1081816 (length bp)
AAGAGTAAAAGCTCTTGATATAGAGCTCCTTAACTGGAAGGTTTAGAAATGAAAACTGTAGCTAAAGAAA
AAGCTTTAGAAAGATTAGAGATAGCACACT
Print the CRISPR sequence : From position bp To position bp