Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_012589_2                                                                                                                 top


Strain : Sulfolobus islandicus L.S.2.15 RefSeq :NC_012589 (chromosome circular)
CRISPR id : NC_012589_2
DR consensus (25 bp) : CTTTCAATCCCTTTTGGGATTTATCNumber of repetitions :4
Begin Position : 616179 End Position : 616396

616179CTTCCAATCCCTTTGAGGATTTATCTCGAAGTGCTTCACAGAATGGAGAAGAAACAATTAATAA 616242
616243CTTTCAATCCCTTTTGGGATTTATCTCTTTGCTGCATATTTGATAAAGCAAGGAGTAAGCCCGT 616306
616307CTTTCAATCCCTTTTGGGATTTATCAAACGCTACGTTGAGCTCAACAACGTAGTGGAAAAGTTAA 616371
616372CTCTTAATCCCTATAGAGATTTATC616396
Left flanking sequence : Till position 616179 (length bp)
TATGGAACTTTAATAGATATTCTTAGTGGTGAAAATTTGAAAAAAAAAATAGAGAACTTTACTGGATAAT
TAAAGGGAAATCTAGATCAGTAAACGTTTA
Right flanking sequence : From position 616396 (length bp)
ATTACATGGCTTATCTAACCAAGGATGATTAGCCAATTTTAACATAAAAAGAAAAGTTGTCAGCTTTAGC
TGGTATATGAAGGAGGCGATAAGGAAGTTA
Print the CRISPR sequence : From position bp To position bp