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CRISPRs details
NC_012804_1
Flanking alignement tool
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NC_012804_1                                                                                                                 
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Strain :
Thermococcus gammatolerans EJ3
RefSeq :
NC_012804 (chromosome circular)
CRISPR id :
NC_012804_1
DR consensus (30 bp) :
CTTTCAATTCTCCTAGAGTCTTATTGCAAC
Number of repetitions :
9
Begin Position :
208373
End Position :
208937
208373
TTTTCGATTCCCTGGGAGTCTTATTGCAAC
GGCCCTGATTATGCAGGCAATGTTCACAGCAATTC
208437
208438
TCTTTCAATTCTCTAGAGTCTTATTGCAAC
CTTCGAGTTTAAGCACTTAGTCAAGTCTAAAAAAG
208502
208503
CTTTCAATTCTCCTAGAGTCTTATTGCAAC
TACGCGCTACTACTGATGAGGAAGGTAGCAGAACTC
208568
208569
CCTTTCAATTCTCTAGAGTCTTATTGCAAC
GGGAAATATACGTCGATATTGACGCTTATAGGGAAAGC
208636
208637
CTTTCAATTCTCCTAGAGTCTTATTGCAAC
CTGGGTTGGCTGGTCTTCGGCATTGCCCTCATCGGCCT
208704
208705
CTTTCAATTCTCCTAGAGTCTTATTGCAAC
AGGCCGTCCCCGACGCATGCATGGCATCCGCCGGATCC
208772
208773
CTTTCAATTCTCCTAGAGTCTTATTGCAAC
CTTGTCCGTACTTCTTCGCGTAAATTCTGCTCGCCTTTT
208841
208842
CTTTCAATTCTCCTAGAGTCTTATTGCAAC
TTGCCCGGCGGGGTTCACATCTTCTATTTGGGTTTC
208907
208908
CTTTCAATTCTCCTAGAGTCTTATTGCAAC
208937
Left flanking sequence : Till position 208373 (length
bp)
TTAAGATCTGAAAGTCCTCTACAAAGGACTTGATTTTTCTTTTGAGGCTCATGTTTCTACCTTGACTTTT
TGAATTAAATATTTTGCGGCTTTGTATTGC
Right flanking sequence : From position 208937 (length
bp)
AGGGCGCGAAATTTGCCCTTTCGCCCAACGAAGAAATAAGAACGTCCCAATATTTAAGCCTTTCTGGAAA
TCGGTCTTGAAACGATCACGAGGGAACTCG
Print the CRISPR sequence : From position
bp To position
bp