Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_013016_4                                                                                                                 top


Strain : Neisseria meningitidis alpha14 RefSeq :NC_013016 (chromosome circular)
CRISPR id : NC_013016_4
DR consensus (28 bp) : CCGGATTCCCGCCTGCGCGGGAATGACGNumber of repetitions :3
Begin Position : 624935 End Position : 625109

624935CTGGATTCCCACTTTCGTGGGAATGACGCGATTAGAGTTTCAAAATTTATTCTAAATAGCTGAAACTCAACACA 625008
625009CTGGATTCCCGCCTGCGCGGGAATGACGAAGTGGAAGTTACCCGAAACTTAAAACAAGCGAAACCGAACGAA 625080
625081CTGGATTCCCACTTTCGTGGGAATGACG625108
Left flanking sequence : Till position 624935 (length bp)
TGCAGGTTTCCGTACGGATGGATTCGTCATTCCCGCGCAGGCGGGAATCCAGACATTCAATGCTAAGGCA
ATTTATCGGGAATGACTGAAACTCAAAAAA
Right flanking sequence : From position 625109 (length bp)
ATTTCAGGTTGCTGTTTTTGGTTTTCTGTTTTTGTGAAAATAACAGGATTTTAGCTTGTGGGTATTTACC
GGAAAAAACAGAAACCGCTCCGCCGTCATT
Print the CRISPR sequence : From position bp To position bp