Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_013131_17                                                                                                                 top


Strain : Catenulispora acidiphila DSM 44928 RefSeq :NC_013131 (chromosome circular)
CRISPR id : NC_013131_17
DR consensus (29 bp) : GGGATCAGCCCCGCGCCTGCGGGGAGCACNumber of repetitions :47
Begin Position : 4461263 End Position : 4464110

4461263GGGACCAGCCCCGCATGCGCGGGGAGCACGAGTTCACCGGGCCGGCCAGTACCACGTTGGC 4461323
4461324GGGATCAGCCACGCATACGCAAGGAGCACTTGTTCACGGTGTTCAAACGGAGTCGGAGAAC 4461384
4461385GGGATCGGCCCCGCATACGCGGGGAGCACCAGCGGGAACGACGCTGGGAACCACGGTCGCG 4461445
4461446GGGATCAGCCCCGCATACGCGGGGAGCACGCGAGACCGAGTACAACTACAACGGCGGGGAC 4461506
4461507GGGATCAGCCCCGCGCCTGCGGGGAGCACGCGCCTACCTTACGATCACGCAGCCGACCGAG 4461567
4461568GGGATCAGCCTCGCGCCTGCGGGGAGCACCTGCGGGTCGAGGTTCGAGCACATGATGCCGAT 4461629
4461630GGGATCAGCCCCGCGCCTGCGGGGAGCACGGGACCGCGACTTCCGGCGGGTACCCCTCGCC 4461690
4461691GGGATCAGCCCCGCGCCTGCGGGGAGCACTCGATCGGCGGCCTGAGCGGCGGAGGCCAGACCACCGCGCCCCA 4461763
4461764GGGATCAGCCCCGCACCTGCGGGGAGCACGGCAAAGGCACTGACCACCCCGAGCTCGTCAT 4461824
4461825GGGATCAGCCCCGCGCCTGCGGAGAGCACGCATTGCGTGCCTGGCAATTCTTTATCTCACG 4461885
4461886AGGATCAGCCCCGCGCCCGCGGGGAGCACACCTTGAACTTCGCCCCGGACATCAGGGTTTG 4461946
4461947GGGATCAGCCCCGCGCCTGCGGGGAGCACTCCCGGCCCTTGGTCTTGGCGCTGCGGTAGTC 4462007
4462008GGGATCAGCCCCGCGCCTGCGGGGAGCACCTGATCGCCGAGGCCTACGACGACGGATCGGG 4462068
4462069GGGATCAGCCCCGCGCCTGCGGGGAGCGCTGGACTGCGTGTCGCATTCTCACTCGCGCCGC 4462129
4462130GGGATCAGCCCCGCGCCTGCGGGGAGCACTCGTCGTCCAGGACCAGCCGCGCGTCCGCCTC 4462190
4462191AGGATCAGCCCCGCGCCTGCGGGGAGCACTCGCCGTTCATCGTCGTCGGCAACACCATCAC 4462251
4462252GGGATCAGCCCCGCGCCTGCGGGGAGCACCTCAATACGGCTCATGCCGGGACCTCCGTCCA 4462312
4462313GGGATCAGCCCCGCGCCTGCGGGGAGCACGTGGTGTGATCAGAGGGCGGCGGCCGGGACCA 4462373
4462374GGGATCAGCCCCGCGCCTGCGGGGAGCACGGCGGTGCCCGCGCTCCGGATCGGTGCCCATC 4462434
4462435GGGATCAGCCCCGCGCCTGCGGGGAGCACGCACTCGCGGTCTACAAGCACACCGATCGACT 4462495
4462496GGGATCAGCCCCGCGCCTGCGGGGAGCACGACAAACGACACCGGCGGCGCCCACAGCCGCG 4462556
4462557GGGATCAGCCCCGCGCCTGCGGGGAGCACCGCGCCGCAGCGTCACGGGTGATCATAGAGGC 4462617
4462618GGGATCAGCCCCGCGCCTGCGGGGAGCACCAGCCCACATCGCCCGCCATGATCCCGCCCGC 4462678
4462679GGGATCAGCCCCGCGCCTGCGGGGAGCACCAGACGGGCGTGAGCATGTAGAACGCGCTGCC 4462739
4462740GGGATCAGCCCCGCGCCTGCGGGGAGCACCCCAGGTTGGTGATGAGACCGGCGCCGGGCCG 4462800
4462801GGGATCAGCCCCGCGCCTGCGGGGAGCACGGACCACTCGCGGCGGCGACCCGCTTACGGCC 4462861
4462862GGGATCAGCCCCGCGCCTGCGGGGAGCACACGGAGGCTGATCCCATGACCCGCAAGCCCTG 4462922
4462923GGGATCAGCCCCGCGCCTGCGGGGAGTACGCCCGGCAGGACTACCTGTCCGACCCGATCAC 4462983
4462984GGGATCAGCCCCGCGCCTGCGGGGAGCACATAGCAACTCAGGGCACTGACACGGGAAGATC 4463044
4463045GGGATCAGCCCCGCGCCTGCGGGGCGCACCTGACCGACACGCAGCCAAGCCGACTGCCTGC 4463105
4463106GGGATCAGCCCCGCGCCTGCGGGGAGCACCTTCTGTGAACACCGCGGTGTCCTCCGATGTG 4463166
4463167GGGATCAGCCCCGCGCCTGCGGGGAGCACGAGCTGAAGGGCGAGTTTGACTCCCTGACCCA 4463227
4463228GGGATCAGCCCCGCGCCTGCGGGGAGCACGCAGACGTCGACGAGCGAACCTCCGAGCCCGA 4463288
4463289GGGATCAGCCCCGCGCCTGCGGGGAGCACTCGGGGACTCACCGGTAGACCTGGGGACCCTT 4463349
4463350GGGATCAGCCCCGCGCCTGCGGGGAGCACCCCGGGATCGACACCCGCGGGCCGGGCCGGAA 4463410
4463411GGGATCAGCCCCGCGCCTGCGGGGAGCACGTGACCTGGGGTCCCTTGTCGGCCGGCGACCC 4463471
4463472GGGATCAGCCCCGCGCCTGCGGGGAGCACCCCGACGTCCGCACGACCATCCGCAGCGTCTC 4463532
4463533GGGATCAGCCCCGCGCCTGCGGGGAGCACCGGCCGGAATCGTCACGGGAATCCCGGGTGAC 4463593
4463594GGGATCAGCCCCGCGCCTGCGGGGAGCACCGGTCTTCAGGACCGTACGTCTGAGCTGGCCT 4463654
4463655GGGATCAGCCCCGCGCCTGCGGGGAGCACCTGACACGGCGTGTCGCGCAGCTCGAGGCGAA 4463715
4463716GGGATCAGCCCCGCGCCTGCGGGGAGCACTCCGGCAACGCAAGGTCGCCGAAGGTGTCAGC 4463776
4463777GGGATCAGCCCCGCGCCTGCGGGGAGCACCATCCTGTCCTGCCTAGCGGGAACGCGGTTAC 4463837
4463838GGGATCAGCCCCGCGCCTGCGGGGAGCACTCTCACCAGCCCCCACGCGACACCCCCGAGTC 4463898
4463899GGGATCAGCCCCGCGCCTGCGGGGAGCACCGGCCCGGTCTGCGGTACGCGGCGGGGAACCC 4463959
4463960GGGATCAGCCCCGCGCCTGCGGGGAGCACCTGTTCATAGCTGACCTCTCGGACCGTTTCGC 4464020
4464021GGGATCAGCCCCGCGCCTGCGGGGAGCACACCCGCCACGCTGACCACCGCCCGGGCCGGCT 4464081
4464082GGGATCAGCCCCGCGCCTGCGGGGAGCAC4464110
Left flanking sequence : Till position 4461263 (length bp)
CTCCATGATCATTGATCCCGTCCGACCCCAAGATCTGTGCCAGAACCACTTCAAACCGCTACAGACGCTT
AGGCACAGTATCGATTCCCTGACTCCCAGA
Right flanking sequence : From position 4464110 (length bp)
TCTGCTTCACGTGCTTGTCTATCGGGCTGAGATGCGGCTGCCGTTGGGTTCCGCAGATTCGGGCATACGT
GTCAATCGGGAAGTCGAGCGAGGCGGAGTA
Print the CRISPR sequence : From position bp To position bp