Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_013161_1                                                                                                                 top


Strain : Cyanothece sp. PCC 8802 RefSeq :NC_013161 (chromosome circular)
CRISPR id : NC_013161_1
DR consensus (37 bp) : GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACNumber of repetitions :15
Begin Position : 512560 End Position : 513623

512560GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACTTCCAAAATACAAAAAACTATTGGGGCAGATGTTGA 512632
512633GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACTTATCTGATGCTTTTCTCAAGCTGTCGCCTGTTTT 512704
512705GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACTCCTTATTCTTGTCTTTCTGATTTTCAAAAAGTTGTT 512778
512779GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACCTCTTACCGATGGAGGCTTTGCCTATTACTTAGCC 512850
512851GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACATCTGTAAGAATCATAATTTAGAATTTGATATAAT 512922
512923GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACTCAGGCTTTTTATCTTTGTCTTTGGTAATCAGTTCCTCA 512998
512999GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACAACTAATAAATTAACCTAAGATTATGACTGAAGTTGCTC 513074
513075GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACTGTACACCTATCTGTTTTGATATTTTCCATTTTAG 513146
513147GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACAACGGAATAATCGCTAATATCGATCCCTAAGTCCTTGGC 513222
513223GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACTTAGGGATTGCGATTTTTTCCGAGGGATCTAAGCA 513294
513295GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACCTAACAGGACAAACCGATCCCCCCCGCCGGAGGAAT 513367
513368GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACTTGATCTAATTTATTGTAATAACGTTCAACTAAAT 513439
513440GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACGCCGAAAACTAGCGAGCACTTCCCCCCATTTTTGCGCT 513514
513515GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAACTGGGATGGTATTGAAGGTAAAGAGCTTTTAGGTTC 513586
513587GTTTCAATCCCATTACTAGGATTCATTAAAAAGAAAC513623
Left flanking sequence : Till position 512560 (length bp)
CGGAGAGATTATTTTTTTGCTCTCTCGTACTTGTGATGATAACAAAGGGATGGTTGATCATCCCTTTTTC
TCGCCATCGTAATAACTATATCCTTCAGGA
Right flanking sequence : From position 513623 (length bp)
TGCGATCGCCCTAATCCAGTCCCCATAAGGATTGTGAGCTTAAATCTGACGGGACTCAAAAAATTGAGTG
ATTGAGAACATCAATTTTAGTGATAACCGA

Print the CRISPR sequence : From position bp To position bp